HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:85.7 nTPM
FANTOM5:339.7 Scaled Tags Per Million
Pig:70.2 nTPM
Mouse:41.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042050Antibody HPA043516Antibody CAB001718
Glial cells HighLowLow
Neuronal cells HighHighHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2529 Female, age 94, left hemisphere 34.8
2148 Female, age 91, left hemisphere 29.5
2621 Female, age 67, right hemisphere 29.1
1855 Male, age 76, left hemisphere 25.8
1898 Male, age 80, left hemisphere 25.7
1911 Female, age 85, right hemisphere 25.4
Dentate gyrus
nTPM: 27.8
2530 Female, age 94, left hemisphere 33.7
2531 Female, age 67, both hemispheres 32.7
2246 Female, age 85, both hemispheres 29.6
2010 Male, age 76, both hemispheres 25.4
1927 Female, age 91, both hemispheres 24.1
2528 Male, age 74, both hemispheres 21.4
Entorhinal gyrus
nTPM: 26.8
2686 Male, age 75, right hemisphere 32.9
2764 Male, age 80, right hemisphere 26.2
2117 Female, age 91, right hemisphere 26.1
2613 Female, age 94, left hemisphere 25.6
1787 Male, age 76, left hemisphere 25.2
1938 Female, age 85, left hemisphere 24.6
Hippocampus, CA1
nTPM: 26.9
2527 Male, age 74, both hemispheres 29.3
2749 Male, age 80, left hemisphere 27.1
1873 Female, age 85, both hemispheres 26.6
2045 Male, age 76, both hemispheres 25.8
2082 Female, age 91, right hemisphere 25.8
Hippocampus, CA2
nTPM: 25.3
1940 Female, age 85, left hemisphere 29.8
2437 Female, age 94, left hemisphere 26.4
2113 Female, age 91, right hemisphere 26.0
1892 Male, age 76, both hemispheres 25.5
1963 Male, age 80, left hemisphere 22.6
2249 Male, age 74, both hemispheres 21.4
Hippocampus, CA3
nTPM: 28.3
2861 Female, age 67, both hemispheres 34.7
2620 Female, age 94, left hemisphere 30.5
1891 Female, age 85, both hemispheres 28.1
2137 Male, age 80, left hemisphere 27.2
1867 Male, age 76, both hemispheres 24.8
2436 Male, age 74, both hemispheres 24.4
Parahippocampal cortex
nTPM: 27.2
2622 Female, age 67, right hemisphere 32.1
2245 Female, age 91, both hemispheres 32.0
2532 Female, age 72, left hemisphere 29.2
2692 Male, age 74, both hemispheres 27.5
1990 Female, age 91, right hemisphere 27.2
1850 Male, age 80, both hemispheres 26.0
1933 Female, age 85, both hemispheres 25.5
2693 Female, age 94, both hemispheres 24.3
2250 Female, age 67, right hemisphere 24.1
2018 Male, age 76, both hemispheres 23.7
Perirhinal gyrus
nTPM: 25.8
2848 Male, age 76, right hemisphere 26.3
1847 Female, age 91, left hemisphere 26.1
1841 Female, age 85, right hemisphere 26.0
2521 Female, age 94, right hemisphere 25.5
1794 Male, age 80, right hemisphere 25.3
Subiculum
nTPM: 25.4
1901 Male, age 80, both hemispheres 27.2
2438 Female, age 94, left hemisphere 26.2
2042 Male, age 76, both hemispheres 26.0
1977 Female, age 85, both hemispheres 25.9
2619 Male, age 74, both hemispheres 24.3
2729 Female, age 91, right hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.7
Samples: 197

Max nTPM: 171.8
Min nTPM: 20.2
Std nTPM: 23.1
Median nTPM: 85.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 171.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 160.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 158.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 136.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 134.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 132.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 131.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 129.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 120.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 117.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 116.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 339.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 339.7
FF:10153-102I9 76 years, female 380.1
FF:10169-103B7 60 years, female 299.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 67.6
Samples: 4

Max nTPM: 73.9
Min nTPM: 61.1
Sample A Female 61.1
Sample B Female 67.4
Sample C Male 73.9
Sample D Male 67.8
Entorhinal cortex
nTPM: 61.5
Samples: 4

Max nTPM: 70.6
Min nTPM: 53.9
Sample A Female 60.0
Sample B Female 61.4
Sample C Male 53.9
Sample D Male 70.6
Subiculum
nTPM: 65.5
Samples: 4

Max nTPM: 70.9
Min nTPM: 58.2
Sample A Female 58.2
Sample B Female 67.1
Sample C Male 65.7
Sample D Male 70.9
Ventral hippocampus
nTPM: 70.2
Samples: 4

Max nTPM: 83.2
Min nTPM: 61.0
Sample A Female 62.4
Sample B Female 61.0
Sample C Male 74.0
Sample D Male 83.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 41.4
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 38.7
Sample C Female 38.7
Sample D Female 41.4
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 48.7
Min nTPM: 35.8
Sample A Male 35.8
Sample B Male 48.7
Sample C Female 44.9
Sample D Female 38.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.