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CLPTM1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:141.8 nTPM
FANTOM5:164.9 Scaled Tags Per Million
Pig:86.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA068767
Glial cells High
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 141.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 141.8
Samples: 246

Max nTPM: 235.0
Min nTPM: 53.5
Std nTPM: 33.7
Median nTPM: 140.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 235.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 233.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 232.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 232.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 224.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 217.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 217.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 212.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 209.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 209.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 202.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 201.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 198.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 197.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 195.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 194.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 191.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 188.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 186.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 186.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 183.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 182.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 182.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 182.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 182.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 182.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 180.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 180.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 180.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 178.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 177.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 176.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 175.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 175.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 175.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 173.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 173.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 173.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 172.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 172.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 171.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 171.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 171.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 170.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 170.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 169.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 168.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 168.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 166.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 166.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 165.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 165.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 165.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 163.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 163.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 163.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 162.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 162.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 162.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 161.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 161.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 161.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 161.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 161.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 161.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 160.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 160.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 160.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 160.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 159.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 159.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 159.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 157.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 157.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 157.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 157.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 157.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 155.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 155.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 155.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 154.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 154.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 154.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 154.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 154.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 153.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 152.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 151.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 151.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 151.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 150.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 150.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 149.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 149.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 149.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 148.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 148.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 147.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 146.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 145.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 145.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 144.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 144.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 144.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 143.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 143.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 142.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 142.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 142.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 141.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 141.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 141.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 141.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 140.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 140.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 140.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 140.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 139.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 139.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 139.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 138.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 138.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 137.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 137.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 136.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 136.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 136.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 135.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 135.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 135.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 134.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 134.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 133.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 132.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 132.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 131.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 131.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 131.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 131.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 130.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 129.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 129.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 128.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 128.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 128.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 128.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 127.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 127.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 127.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 127.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 127.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 125.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 125.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 125.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 125.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 125.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 124.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 124.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 123.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 122.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 122.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 121.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 121.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 121.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 120.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 119.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 119.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 118.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 117.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 117.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 116.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 114.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 114.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 113.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 113.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 113.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 113.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 113.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 112.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 111.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 110.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 107.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 107.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 105.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 103.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 103.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 100.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 100.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 100.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 100.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 100.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 100.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 99.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 97.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 95.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 95.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 95.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 93.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 92.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 91.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 87.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 86.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 85.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 85.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 78.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 69.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 67.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 64.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 164.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 164.9
FF:10164-103B2 76 years, female 164.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 86.1
Pig sample Sample description nTPM
Caudate
nTPM: 86.1
Samples: 4

Max nTPM: 106.0
Min nTPM: 65.3
Sample A Female 65.3
Sample B Female 88.3
Sample C Male 106.0
Sample D Male 84.7

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