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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:251.8 nTPM
FANTOM5:538.5 Scaled Tags Per Million
Pig:272.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA009291
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 251.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 251.8
Samples: 246

Max nTPM: 520.0
Min nTPM: 122.9
Std nTPM: 69.8
Median nTPM: 238.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 520.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 489.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 486.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 481.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 460.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 442.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 430.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 420.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 417.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 416.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 415.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 404.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 400.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 397.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 379.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 379.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 373.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 370.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 364.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 362.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 356.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 352.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 351.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 345.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 345.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 343.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 343.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 340.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 335.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 333.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 329.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 327.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 326.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 322.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 316.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 313.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 313.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 312.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 311.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 311.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 306.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 304.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 302.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 301.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 300.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 299.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 298.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 293.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 293.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 293.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 292.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 291.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 291.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 290.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 290.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 290.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 288.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 287.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 286.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 286.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 286.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 285.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 285.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 283.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 283.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 281.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 280.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 277.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 277.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 276.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 275.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 274.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 272.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 272.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 271.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 269.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 268.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 267.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 267.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 266.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 266.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 265.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 265.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 265.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 263.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 263.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 263.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 261.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 261.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 259.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 259.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 259.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 256.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 255.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 255.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 254.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 253.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 253.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 253.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 253.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 251.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 251.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 251.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 250.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 249.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 249.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 248.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 248.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 248.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 246.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 246.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 246.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 244.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 243.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 243.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 241.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 241.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 241.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 240.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 240.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 239.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 238.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 238.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 237.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 237.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 236.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 235.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 235.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 235.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 234.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 234.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 234.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 232.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 232.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 232.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 232.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 230.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 230.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 229.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 229.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 229.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 228.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 228.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 228.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 228.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 227.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 227.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 224.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 224.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 223.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 222.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 222.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 222.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 221.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 218.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 218.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 218.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 217.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 216.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 216.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 215.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 215.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 214.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 213.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 213.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 213.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 212.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 212.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 212.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 211.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 210.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 209.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 208.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 207.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 207.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 207.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 207.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 206.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 206.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 205.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 205.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 205.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 205.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 205.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 204.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 204.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 204.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 203.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 203.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 202.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 201.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 201.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 200.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 200.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 199.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 197.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 197.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 197.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 197.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 196.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 196.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 195.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 194.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 192.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 192.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 190.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 188.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 187.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 187.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 186.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 186.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 186.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 185.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 185.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 183.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 182.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 182.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 182.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 181.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 181.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 179.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 176.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 175.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 174.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 174.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 173.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 172.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 171.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 171.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 170.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 170.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 169.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 167.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 164.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 161.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 161.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 160.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 159.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 145.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 138.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 138.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 137.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 129.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 538.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 538.5
FF:10164-103B2 76 years, female 538.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 272.7
Pig sample Sample description nTPM
Caudate
nTPM: 272.7
Samples: 4

Max nTPM: 304.1
Min nTPM: 240.4
Sample A Female 245.3
Sample B Female 301.0
Sample C Male 304.1
Sample D Male 240.4

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