HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:319.4 nTPM
HPA:319.4 nTPM
GTEx:466.1 nTPM
FANTOM5:342.5 Scaled Tags Per Million
Pig:334.4 nTPM
Mouse:356.5 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 319.4
Sample id Sample description nTPM
Hippocampus
nTPM: 302.9
1898 Male, age 80, left hemisphere 334.9
2621 Female, age 67, right hemisphere 334.2
2529 Female, age 94, left hemisphere 298.3
1911 Female, age 85, right hemisphere 297.2
2148 Female, age 91, left hemisphere 287.7
1855 Male, age 76, left hemisphere 265.4
Dentate gyrus
nTPM: 293.1
2530 Female, age 94, left hemisphere 333.3
1927 Female, age 91, both hemispheres 331.1
2010 Male, age 76, both hemispheres 288.6
2531 Female, age 67, both hemispheres 282.5
2246 Female, age 85, both hemispheres 268.6
2528 Male, age 74, both hemispheres 254.4
Entorhinal gyrus
nTPM: 319.4
2613 Female, age 94, left hemisphere 352.5
2764 Male, age 80, right hemisphere 338.4
2686 Male, age 75, right hemisphere 336.0
1938 Female, age 85, left hemisphere 315.9
1787 Male, age 76, left hemisphere 291.2
2117 Female, age 91, right hemisphere 282.2
Hippocampus, CA1
nTPM: 294.0
2749 Male, age 80, left hemisphere 358.6
1873 Female, age 85, both hemispheres 299.0
2527 Male, age 74, both hemispheres 293.2
2045 Male, age 76, both hemispheres 261.3
2082 Female, age 91, right hemisphere 257.8
Hippocampus, CA2
nTPM: 304.6
1963 Male, age 80, left hemisphere 345.7
1892 Male, age 76, both hemispheres 328.5
2437 Female, age 94, left hemisphere 318.2
1940 Female, age 85, left hemisphere 297.0
2249 Male, age 74, both hemispheres 271.8
2113 Female, age 91, right hemisphere 266.2
Hippocampus, CA3
nTPM: 294.6
2861 Female, age 67, both hemispheres 329.2
2137 Male, age 80, left hemisphere 308.7
1867 Male, age 76, both hemispheres 300.9
2620 Female, age 94, left hemisphere 293.8
1891 Female, age 85, both hemispheres 285.6
2436 Male, age 74, both hemispheres 249.5
Parahippocampal cortex
nTPM: 312.6
2622 Female, age 67, right hemisphere 350.8
2245 Female, age 91, both hemispheres 322.8
1990 Female, age 91, right hemisphere 315.9
2693 Female, age 94, both hemispheres 314.0
1850 Male, age 80, both hemispheres 312.6
1933 Female, age 85, both hemispheres 312.1
2692 Male, age 74, both hemispheres 305.3
2532 Female, age 72, left hemisphere 299.3
2018 Male, age 76, both hemispheres 297.5
2250 Female, age 67, right hemisphere 295.6
Perirhinal gyrus
nTPM: 314.9
1794 Male, age 80, right hemisphere 329.1
1847 Female, age 91, left hemisphere 322.2
1841 Female, age 85, right hemisphere 319.8
2521 Female, age 94, right hemisphere 304.5
2848 Male, age 76, right hemisphere 299.0
Subiculum
nTPM: 294.0
1901 Male, age 80, both hemispheres 311.4
2438 Female, age 94, left hemisphere 309.2
2619 Male, age 74, both hemispheres 306.0
1977 Female, age 85, both hemispheres 300.5
2042 Male, age 76, both hemispheres 271.0
2729 Female, age 91, right hemisphere 265.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 466.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 466.1
Samples: 197

Max nTPM: 1109.3
Min nTPM: 136.3
Std nTPM: 178.2
Median nTPM: 443.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1109.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1083.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 961.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 957.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 956.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 883.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 872.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 840.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 816.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 797.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 791.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 342.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 342.5
FF:10169-103B7 60 years, female 365.1
FF:10153-102I9 76 years, female 319.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 334.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 283.2
Samples: 4

Max nTPM: 370.1
Min nTPM: 208.1
Sample A Female 370.1
Sample B Female 283.4
Sample C Male 271.0
Sample D Male 208.1
Entorhinal cortex
nTPM: 334.4
Samples: 4

Max nTPM: 373.1
Min nTPM: 277.6
Sample A Female 348.0
Sample B Female 339.0
Sample C Male 373.1
Sample D Male 277.6
Subiculum
nTPM: 264.1
Samples: 4

Max nTPM: 374.6
Min nTPM: 221.0
Sample A Female 374.6
Sample B Female 221.8
Sample C Male 238.8
Sample D Male 221.0
Ventral hippocampus
nTPM: 273.6
Samples: 4

Max nTPM: 330.5
Min nTPM: 185.1
Sample A Female 294.9
Sample B Female 185.1
Sample C Male 330.5
Sample D Male 283.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 356.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 356.5
Samples: 4

Max nTPM: 369.4
Min nTPM: 344.8
Sample A Male 369.4
Sample B Male 359.2
Sample C Female 344.8
Sample D Female 352.4
Hippocampal formation
nTPM: 353.6
Samples: 4

Max nTPM: 367.1
Min nTPM: 341.3
Sample A Male 358.5
Sample B Male 341.3
Sample C Female 347.5
Sample D Female 367.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
69524404 Antisense, RP_050419_04_C07, Mouse strain C57BL/6J (56 days, male) 17.6

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