PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:64.9 nTPM
HPA:64.9 nTPM
FANTOM5:80.2 Scaled Tags Per Million
Pig:41.9 nTPM
Mouse:75.9 nTPM
Allen mouse:1.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 59.7
2301 Female, age 85, both hemispheres 66.1
2188 Female, age 91, both hemispheres 60.5
2090 Male, age 80, both hemispheres 58.1
1984 Male, age 76, both hemispheres 54.2
Area postrema
nTPM: 59.5
2799 Male, age 61, both hemispheres 64.6
2306 Male, age 80, both hemispheres 59.5
2054 Male, age 76, both hemispheres 54.4
Cuneate nuclei
nTPM: 57.9
2131 Male, age 76, both hemispheres 61.0
2381 Male, age 80, both hemispheres 58.3
2376 Male, age 61, both hemispheres 54.4
Dorsal cochlear nucleus
nTPM: 57.3
2187 Female, age 91, both hemispheres 61.2
2802 Male, age 74, right hemisphere 58.3
2058 Male, age 76, both hemispheres 57.3
2370 Male, age 61, both hemispheres 57.2
2378 Male, age 80, both hemispheres 52.7
Dorsal medullary reticular nucleus
nTPM: 57.4
2088 Male, age 76, both hemispheres 60.1
2040 Female, age 85, both hemispheres 57.2
2373 Male, age 61, both hemispheres 54.9
Dorsal motor vagal complex
nTPM: 59.0
2797 Male, age 61, both hemispheres 63.7
2185 Male, age 76, both hemispheres 63.0
2643 Male, age 74, both hemispheres 61.2
2844 Male, age 55, unknown 59.2
2000 Male, age 74, unknown 58.4
2813 Female, age 72, unknown 57.2
2133 Female, age 91, both hemispheres 56.1
2807 Female, age 85, both hemispheres 53.1
Dorsal tegmental nucleus
nTPM: 59.8
2358 Male, age 61, both hemispheres 66.8
2083 Male, age 80, both hemispheres 59.5
2326 Male, age 74, both hemispheres 56.6
1936 Male, age 76, left hemisphere 56.4
Dorsolateral tegmental area
nTPM: 55.8
2751 Female, age 85, both hemispheres 59.1
2337 Male, age 61, both hemispheres 57.0
2654 Male, age 80, both hemispheres 56.9
2141 Male, age 76, both hemispheres 56.0
2360 Male, age 74, both hemispheres 49.9
Gigantocellular reticular nuclei, medullary
nTPM: 57.1
2314 Male, age 61, both hemispheres 60.3
1876 Female, age 85, both hemispheres 57.8
2462 Male, age 74, both hemispheres 56.5
2310 Male, age 80, both hemispheres 56.3
2387 Female, age 91, both hemispheres 56.1
2022 Male, age 76, right hemisphere 55.7
Gigantocellular reticular nuclei, pars
nTPM: 56.8
2336 Male, age 61, both hemispheres 57.8
2168 Male, age 76, both hemispheres 57.3
2084 Female, age 85, both hemispheres 57.1
2706 Male, age 80, both hemispheres 56.1
2330 Male, age 80, both hemispheres 55.8
Inferior olive
nTPM: 61.1
2628 Female, age 91, both hemispheres 64.5
2563 Male, age 74, both hemispheres 63.0
2085 Female, age 85, both hemispheres 61.5
2178 Male, age 61, both hemispheres 59.9
2379 Male, age 80, both hemispheres 56.8
Kolliker-Fuse nucleus
nTPM: 58.3
2793 Female, age 91, left hemisphere 64.4
2163 Male, age 80, both hemispheres 56.2
2315 Male, age 76, right hemisphere 54.3
Lateral lemniscal nuclei
nTPM: 57.1
2169 Male, age 76, both hemispheres 59.8
2320 Female, age 91, left hemisphere 58.1
2746 Female, age 85, left hemisphere 57.3
2453 Male, age 74, right hemisphere 56.4
2036 Male, age 80, both hemispheres 53.9
Lateral medullary reticular nucleus
nTPM: 60.9
2305 Male, age 74, both hemispheres 63.5
2852 Male, age 80, both hemispheres 62.5
2374 Male, age 61, both hemispheres 60.9
2804 Female, age 91, both hemispheres 59.7
2190 Female, age 85, both hemispheres 59.5
2044 Male, age 76, both hemispheres 59.2
Lateral parabrachial nucleus
nTPM: 57.6
2792 Male, age 76, both hemispheres 59.7
2790 Male, age 61, both hemispheres 57.7
2139 Female, age 85, right hemisphere 56.7
2013 Male, age 80, both hemispheres 56.4
Lateral vestibular nucleus
nTPM: 57.0
2311 Male, age 80, both hemispheres 58.1
2184 Male, age 76, both hemispheres 55.9
Locus coeruleus
nTPM: 57.7
2720 Male, age 74, both hemispheres 61.6
2014 Male, age 55, unknown 59.2
2162 Male, age 80, both hemispheres 59.0
1980 Male, age 76, both hemispheres 57.8
2317 Female, age 72, unknown 57.5
2123 Female, age 91, both hemispheres 57.2
2788 Male, age 74, unknown 51.6
Medial olivary nucleus
nTPM: 60.4
1962 Male, age 76, both hemispheres 63.5
2138 Female, age 91, both hemispheres 61.4
2851 Male, age 80, both hemispheres 60.0
1943 Male, age 61, both hemispheres 56.9
Medial parabrachial nucleus
nTPM: 60.0
2170 Female, age 91, both hemispheres 64.9
2156 Male, age 61, both hemispheres 59.4
2786 Male, age 76, both hemispheres 59.1
2463 Female, age 85, right hemisphere 58.6
2854 Male, age 80, both hemispheres 58.1
Medial periolivary nuclei
nTPM: 57.6
2063 Male, age 76, both hemispheres 58.9
2791 Male, age 74, right hemisphere 58.2
2081 Male, age 80, both hemispheres 57.5
2458 Female, age 91, both hemispheres 56.6
2171 Female, age 85, both hemispheres 56.5
Medial vestibular nucleus
nTPM: 57.5
2801 Male, age 74, both hemispheres 61.7
2624 Male, age 61, both hemispheres 61.0
2093 Male, age 80, both hemispheres 57.1
2803 Female, age 91, both hemispheres 56.9
2743 Female, age 85, both hemispheres 54.9
2134 Male, age 76, both hemispheres 53.6
Motor facial nucleus
nTPM: 58.5
2365 Male, age 74, right hemisphere 61.1
2062 Male, age 76, both hemispheres 61.0
2697 Female, age 85, both hemispheres 60.9
2795 Female, age 91, both hemispheres 58.7
2126 Male, age 61, both hemispheres 55.1
2327 Male, age 80, both hemispheres 54.2
Motor hypoglossal nucleus
nTPM: 58.4
2182 Male, age 80, both hemispheres 61.3
2461 Male, age 61, both hemispheres 60.3
2125 Female, age 91, both hemispheres 59.4
2132 Female, age 85, both hemispheres 58.4
2277 Male, age 76, both hemispheres 52.6
Motor trigeminal nucleus
nTPM: 56.9
2560 Male, age 74, both hemispheres 59.0
2321 Female, age 91, both hemispheres 57.9
2079 Male, age 80, both hemispheres 57.4
2309 Male, age 76, both hemispheres 56.3
2335 Male, age 61, both hemispheres 53.8
Nuclei of the trapezoid body
nTPM: 57.9
1983 Male, age 76, both hemispheres 61.5
2166 Male, age 80, both hemispheres 59.1
2368 Female, age 91, both hemispheres 57.7
2735 Female, age 85, both hemispheres 56.1
2159 Male, age 61, both hemispheres 54.9
Nucleus ambiguus
nTPM: 64.9
2071 Male, age 76, both hemispheres 67.0
2096 Female, age 85, both hemispheres 62.7
Nucleus cuneatus
nTPM: 60.7
2100 Male, age 76, both hemispheres 65.2
2564 Male, age 74, both hemispheres 62.0
2805 Female, age 91, both hemispheres 61.2
2808 Female, age 85, both hemispheres 59.3
2380 Male, age 80, both hemispheres 58.4
2562 Male, age 61, both hemispheres 57.9
Nucleus gracilis
nTPM: 61.9
2627 Male, age 74, both hemispheres 63.9
2382 Male, age 80, both hemispheres 62.3
2299 Female, age 85, both hemispheres 59.5
Nucleus raphe magnus
nTPM: 59.1
2051 Male, age 76, both hemispheres 61.6
2455 Male, age 74, both hemispheres 60.9
2328 Male, age 80, both hemispheres 58.9
2160 Male, age 61, both hemispheres 58.5
2459 Female, age 91, both hemispheres 57.5
2172 Female, age 85, both hemispheres 57.1
Nucleus raphe obscurus
nTPM: 61.2
2845 Female, age 85, midline 64.7
2142 Male, age 76, midline 63.3
2800 Male, age 61, midline 55.6
Nucleus raphe pallidus
nTPM: 60.6
2145 Male, age 76, midline 67.3
2183 Male, age 80, midline 60.2
1924 Male, age 61, midline 54.2
Nucleus tractus solitarii
nTPM: 51.3
2656 Male, age 76, both hemispheres 56.2
2307 Male, age 80, both hemispheres 53.2
2191 Female, age 85, both hemispheres 51.4
2144 Female, age 91, right hemisphere 44.5
Paramedian reticular nucleus
nTPM: 56.0
2050 Female, age 85, both hemispheres 58.5
2057 Male, age 80, both hemispheres 57.3
2313 Male, age 61, both hemispheres 55.1
2052 Male, age 76, both hemispheres 53.1
Parvicellular reticular nuclei
nTPM: 58.5
2095 Male, age 76, both hemispheres 59.8
2119 Male, age 80, both hemispheres 58.5
2558 Male, age 74, both hemispheres 57.1
Parvicellular reticular nuclei, medullary
nTPM: 56.8
2189 Female, age 91, both hemispheres 58.3
2181 Male, age 80, left hemisphere 56.5
2091 Female, age 85, both hemispheres 55.6
Peritrigeminal nucleus
nTPM: 60.0
2136 Male, age 76, both hemispheres 61.8
2067 Female, age 85, both hemispheres 61.4
2179 Male, age 61, both hemispheres 56.9
Pontine nuclei
nTPM: 60.4
1863 Male, age 55, unknown 63.5
2454 Male, age 74, left hemisphere 62.8
1968 Male, age 76, left hemisphere 62.5
2109 Female, age 72, unknown 62.4
2787 Female, age 85, both hemispheres 61.8
2319 Female, age 91, both hemispheres 59.3
2115 Male, age 80, left hemisphere 57.5
2727 Male, age 61, right hemisphere 53.5
Pontine raphe nucleus
nTPM: 55.1
2122 Female, age 85, midline 55.8
2853 Male, age 76, midline 54.4
Posteroventral cochlear nucleus
nTPM: 57.8
2135 Female, age 91, both hemispheres 63.6
2070 Male, age 76, both hemispheres 58.0
2341 Male, age 80, both hemispheres 56.6
2371 Male, age 61, both hemispheres 56.0
2752 Female, age 85, both hemispheres 54.5
Prepositus hypoglossal nucleus
nTPM: 56.9
2855 Female, age 85, right hemisphere 60.0
2086 Male, age 80, both hemispheres 53.8
Principal sensory trigeminal nucleus
nTPM: 57.7
2367 Female, age 91, left hemisphere 61.8
2158 Male, age 61, both hemispheres 57.6
2324 Male, age 76, both hemispheres 56.4
2008 Male, age 80, left hemisphere 54.8
Reticular pontine nucleus, caudal
nTPM: 60.4
2457 Female, age 91, both hemispheres 62.3
2559 Male, age 74, both hemispheres 61.9
2092 Male, age 76, both hemispheres 60.0
2332 Male, age 80, right hemisphere 57.5
Reticular pontine nucleus, oral
nTPM: 58.1
2366 Female, age 91, both hemispheres 61.2
2167 Male, age 76, both hemispheres 59.9
2012 Female, age 85, both hemispheres 57.9
1939 Male, age 80, both hemispheres 57.5
2361 Male, age 74, both hemispheres 54.3
Reticulotegmental nucleus
nTPM: 57.1
2322 Female, age 91, both hemispheres 60.1
2452 Male, age 74, both hemispheres 57.3
2333 Male, age 80, both hemispheres 55.8
2325 Male, age 76, both hemispheres 55.0
Spinal trigeminal nucleus, caudal
nTPM: 58.7
2447 Male, age 76, both hemispheres 62.0
2642 Male, age 74, both hemispheres 59.4
2308 Male, age 80, both hemispheres 58.5
2312 Male, age 61, both hemispheres 57.6
2390 Female, age 91, both hemispheres 56.1
Spinal trigeminal nucleus, interpolar
nTPM: 56.0
2066 Male, age 76, right hemisphere 59.6
2033 Male, age 80, both hemispheres 56.3
2625 Male, age 61, both hemispheres 56.2
2386 Female, age 85, both hemispheres 55.5
2389 Female, age 91, both hemispheres 52.6
Spinal trigeminal nucleus, oral
nTPM: 55.9
1978 Male, age 76, both hemispheres 59.2
2164 Male, age 80, both hemispheres 56.0
2737 Female, age 85, both hemispheres 52.4
Spinal vestibular nucleus
nTPM: 58.2
2748 Male, age 76, both hemispheres 60.9
2384 Male, age 74, both hemispheres 58.3
2186 Female, age 91, both hemispheres 58.0
2806 Female, age 85, both hemispheres 58.0
2796 Male, age 61, both hemispheres 57.3
2780 Male, age 80, both hemispheres 56.6
Subcoeruleus area
nTPM: 57.6
2089 Male, age 76, left hemisphere 58.4
2451 Male, age 74, both hemispheres 58.0
1958 Male, age 80, both hemispheres 57.8
2369 Female, age 85, left hemisphere 57.7
2323 Female, age 91, left hemisphere 56.4
Superior olive
nTPM: 58.4
2020 Male, age 76, both hemispheres 60.4
2561 Female, age 91, both hemispheres 60.4
2329 Male, age 80, right hemisphere 57.9
2364 Male, age 74, right hemisphere 57.8
1875 Female, age 85, both hemispheres 55.7
Superior vestibular nucleus
nTPM: 56.3
2061 Male, age 76, both hemispheres 58.8
2015 Male, age 80, both hemispheres 56.3
2383 Male, age 74, both hemispheres 53.7
Ventral medullary reticular nucleus
nTPM: 58.7
2060 Male, age 76, both hemispheres 60.0
2372 Male, age 61, both hemispheres 57.5
Ventral periolivary nuclei
nTPM: 57.5
2130 Female, age 85, both hemispheres 59.4
2165 Male, age 80, both hemispheres 59.4
2023 Male, age 76, both hemispheres 58.1
2794 Female, age 91, left hemisphere 52.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 59.2
2302 Female, age 91, both hemispheres 60.5
1986 Male, age 76, both hemispheres 59.6
2118 Male, age 80, both hemispheres 59.3
2180 Male, age 61, both hemispheres 58.7
2741 Female, age 85, both hemispheres 57.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 58.1
1959 Male, age 76, both hemispheres 61.3
2449 Male, age 74, both hemispheres 59.4
2161 Male, age 80, both hemispheres 58.6
2456 Female, age 91, both hemispheres 57.5
2840 Female, age 85, both hemispheres 57.0
2359 Male, age 61, both hemispheres 54.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 58.2
FF:10182-103D2 60 years, female 60.8
FF:10165-103B3 76 years, female 55.6
Medulla oblongata
Scaled Tags Per Million: 69.3
FF:10038-101F2 18-64 years, mixed 87.0
FF:10174-103C3 60 years, female 72.3
FF:10155-103A2 76 years, female 48.5
Pons
Scaled Tags Per Million: 80.2
FF:10033-101E6 18-54 years, mixed 80.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 41.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 37.1
Samples: 4

Max nTPM: 40.8
Min nTPM: 33.5
Sample A Female 40.8
Sample B Female 33.5
Sample C Male 37.3
Sample D Male 36.6
Pons
nTPM: 41.9
Samples: 4

Max nTPM: 55.4
Min nTPM: 32.9
Sample A Female 55.4
Sample B Female 32.9
Sample C Male 37.3
Sample D Male 42.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 75.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 75.9
Samples: 4

Max nTPM: 85.3
Min nTPM: 67.8
Sample A Male 85.3
Sample B Male 69.0
Sample C Female 81.5
Sample D Female 67.8

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
68076557 Antisense, RP_040923_02_G06, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 1.0
68076557 Antisense, RP_040923_02_G06, Mouse strain C57BL/6J (56 days, male) 1.0

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