HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.9 nTPM
HPA:43.9 nTPM
GTEx:30.3 nTPM
FANTOM5:1.3 Scaled Tags Per Million
Pig:4.2 nTPM
Mouse:4.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058448
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.7
1911 Female, age 85, right hemisphere 44.6
2148 Female, age 91, left hemisphere 43.4
2529 Female, age 94, left hemisphere 41.6
2621 Female, age 67, right hemisphere 41.1
1855 Male, age 76, left hemisphere 39.9
1898 Male, age 80, left hemisphere 39.9
Dentate gyrus
nTPM: 39.8
1927 Female, age 91, both hemispheres 43.8
2531 Female, age 67, both hemispheres 40.7
2246 Female, age 85, both hemispheres 40.6
2010 Male, age 76, both hemispheres 40.2
2528 Male, age 74, both hemispheres 39.3
2530 Female, age 94, left hemisphere 34.4
Entorhinal gyrus
nTPM: 40.3
1938 Female, age 85, left hemisphere 42.5
1787 Male, age 76, left hemisphere 41.2
2117 Female, age 91, right hemisphere 41.2
2764 Male, age 80, right hemisphere 40.3
2686 Male, age 75, right hemisphere 39.6
2613 Female, age 94, left hemisphere 37.1
Hippocampus, CA1
nTPM: 42.6
2045 Male, age 76, both hemispheres 45.7
2749 Male, age 80, left hemisphere 42.4
2082 Female, age 91, right hemisphere 41.8
2527 Male, age 74, both hemispheres 41.8
1873 Female, age 85, both hemispheres 41.4
Hippocampus, CA2
nTPM: 39.5
2113 Female, age 91, right hemisphere 42.6
1940 Female, age 85, left hemisphere 41.3
1892 Male, age 76, both hemispheres 40.1
2437 Female, age 94, left hemisphere 38.0
2249 Male, age 74, both hemispheres 37.8
1963 Male, age 80, left hemisphere 37.4
Hippocampus, CA3
nTPM: 40.2
2137 Male, age 80, left hemisphere 41.2
1891 Female, age 85, both hemispheres 40.2
2620 Female, age 94, left hemisphere 40.2
1867 Male, age 76, both hemispheres 40.1
2436 Male, age 74, both hemispheres 39.9
2861 Female, age 67, both hemispheres 39.7
Parahippocampal cortex
nTPM: 43.9
2250 Female, age 67, right hemisphere 46.8
1933 Female, age 85, both hemispheres 45.7
2622 Female, age 67, right hemisphere 45.2
2245 Female, age 91, both hemispheres 44.6
2693 Female, age 94, both hemispheres 44.4
2692 Male, age 74, both hemispheres 43.9
2532 Female, age 72, left hemisphere 43.8
1850 Male, age 80, both hemispheres 42.4
1990 Female, age 91, right hemisphere 41.2
2018 Male, age 76, both hemispheres 40.8
Perirhinal gyrus
nTPM: 43.6
2521 Female, age 94, right hemisphere 45.9
1841 Female, age 85, right hemisphere 44.4
2848 Male, age 76, right hemisphere 43.2
1847 Female, age 91, left hemisphere 42.6
1794 Male, age 80, right hemisphere 42.0
Subiculum
nTPM: 41.1
2438 Female, age 94, left hemisphere 43.4
1977 Female, age 85, both hemispheres 41.9
2729 Female, age 91, right hemisphere 41.6
2619 Male, age 74, both hemispheres 41.3
1901 Male, age 80, both hemispheres 40.6
2042 Male, age 76, both hemispheres 38.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.3
Samples: 197

Max nTPM: 109.8
Min nTPM: 0.8
Std nTPM: 20.3
Median nTPM: 24.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 109.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 102.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 95.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 93.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 92.9
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 78.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 74.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 71.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 69.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 67.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.3
FF:10153-102I9 76 years, female 1.7
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.1
Sample A Female 5.3
Sample B Female 3.1
Sample C Male 4.6
Sample D Male 3.8
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 3.4
Sample C Male 4.6
Sample D Male 3.4
Subiculum
nTPM: 2.5
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.5
Sample C Male 2.4
Sample D Male 2.9
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.4
Sample A Female 2.7
Sample B Female 2.4
Sample C Male 2.6
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 5.7
Min nTPM: 2.0
Sample A Male 4.8
Sample B Male 5.7
Sample C Female 4.1
Sample D Female 2.0
Hippocampal formation
nTPM: 3.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.6
Sample A Male 4.4
Sample B Male 3.6
Sample C Female 2.6
Sample D Female 4.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
74821765 Antisense, RP_060215_02_D09, Mouse strain C57BL/6J (56 days, male) 0.2
77280576 Antisense, RP_070116_01_G02, Mouse strain C57BL/6J (56 days, male) 0.1

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