HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:66.2 nTPM
HPA:66.2 nTPM
GTEx:61.5 nTPM
FANTOM5:221.3 Scaled Tags Per Million
Pig:43.7 nTPM
Mouse:66.4 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051712
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.2
Sample id Sample description nTPM
Hippocampus
nTPM: 64.9
2621 Female, age 67, right hemisphere 69.4
1898 Male, age 80, left hemisphere 66.6
1855 Male, age 76, left hemisphere 65.2
2148 Female, age 91, left hemisphere 64.0
2529 Female, age 94, left hemisphere 62.9
1911 Female, age 85, right hemisphere 61.2
Dentate gyrus
nTPM: 63.4
2531 Female, age 67, both hemispheres 65.1
1927 Female, age 91, both hemispheres 64.9
2530 Female, age 94, left hemisphere 63.9
2246 Female, age 85, both hemispheres 62.9
2010 Male, age 76, both hemispheres 62.2
2528 Male, age 74, both hemispheres 61.6
Entorhinal gyrus
nTPM: 62.9
2764 Male, age 80, right hemisphere 65.7
1787 Male, age 76, left hemisphere 64.1
1938 Female, age 85, left hemisphere 63.4
2613 Female, age 94, left hemisphere 63.0
2686 Male, age 75, right hemisphere 61.9
2117 Female, age 91, right hemisphere 59.1
Hippocampus, CA1
nTPM: 65.3
2749 Male, age 80, left hemisphere 76.5
1873 Female, age 85, both hemispheres 65.1
2527 Male, age 74, both hemispheres 63.6
2045 Male, age 76, both hemispheres 63.4
2082 Female, age 91, right hemisphere 58.1
Hippocampus, CA2
nTPM: 63.5
1892 Male, age 76, both hemispheres 69.2
1963 Male, age 80, left hemisphere 64.8
2249 Male, age 74, both hemispheres 62.7
2437 Female, age 94, left hemisphere 62.6
1940 Female, age 85, left hemisphere 62.3
2113 Female, age 91, right hemisphere 59.5
Hippocampus, CA3
nTPM: 65.6
2137 Male, age 80, left hemisphere 72.8
2861 Female, age 67, both hemispheres 66.4
1867 Male, age 76, both hemispheres 65.4
2620 Female, age 94, left hemisphere 64.9
2436 Male, age 74, both hemispheres 62.9
1891 Female, age 85, both hemispheres 61.2
Parahippocampal cortex
nTPM: 64.4
2245 Female, age 91, both hemispheres 67.9
2250 Female, age 67, right hemisphere 67.1
1850 Male, age 80, both hemispheres 66.1
1933 Female, age 85, both hemispheres 64.7
2622 Female, age 67, right hemisphere 64.5
2532 Female, age 72, left hemisphere 64.2
2692 Male, age 74, both hemispheres 63.2
1990 Female, age 91, right hemisphere 62.6
2018 Male, age 76, both hemispheres 62.2
2693 Female, age 94, both hemispheres 61.4
Perirhinal gyrus
nTPM: 66.2
1847 Female, age 91, left hemisphere 68.3
1794 Male, age 80, right hemisphere 67.8
1841 Female, age 85, right hemisphere 65.2
2521 Female, age 94, right hemisphere 65.2
2848 Male, age 76, right hemisphere 64.7
Subiculum
nTPM: 61.7
1901 Male, age 80, both hemispheres 66.1
1977 Female, age 85, both hemispheres 61.9
2619 Male, age 74, both hemispheres 61.9
2042 Male, age 76, both hemispheres 61.4
2438 Female, age 94, left hemisphere 60.3
2729 Female, age 91, right hemisphere 58.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 124.1
Min nTPM: 27.1
Std nTPM: 16.2
Median nTPM: 60.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 112.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 104.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 103.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 102.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 100.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 94.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 92.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 92.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 221.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 221.3
FF:10169-103B7 60 years, female 262.6
FF:10153-102I9 76 years, female 180.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.7
Samples: 4

Max nTPM: 54.1
Min nTPM: 34.0
Sample A Female 54.1
Sample B Female 43.5
Sample C Male 43.2
Sample D Male 34.0
Entorhinal cortex
nTPM: 41.7
Samples: 4

Max nTPM: 45.3
Min nTPM: 37.2
Sample A Female 42.4
Sample B Female 45.3
Sample C Male 41.8
Sample D Male 37.2
Subiculum
nTPM: 41.8
Samples: 4

Max nTPM: 52.6
Min nTPM: 36.4
Sample A Female 52.6
Sample B Female 40.2
Sample C Male 37.8
Sample D Male 36.4
Ventral hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 44.6
Min nTPM: 35.2
Sample A Female 41.6
Sample B Female 35.2
Sample C Male 44.1
Sample D Male 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.4
Samples: 4

Max nTPM: 70.0
Min nTPM: 63.7
Sample A Male 64.9
Sample B Male 66.9
Sample C Female 70.0
Sample D Female 63.7
Hippocampal formation
nTPM: 63.4
Samples: 4

Max nTPM: 68.9
Min nTPM: 59.3
Sample A Male 68.9
Sample B Male 62.3
Sample C Female 62.9
Sample D Female 59.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
275684 Antisense, RP_040617_01_B05, Mouse strain C57BL/6J (56 days, male) 9.2

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