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RPS16
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1665.1 nTPM
HPA:670.8 nTPM
GTEx:1665.1 nTPM
FANTOM5:907.0 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA064222
Glandular cells Medium


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 670.8
overview
Male, age 65
Small intestine sample 232
nTPM: 779.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 607.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 596.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 699.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1665.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1665.1
Samples: 187

Max nTPM: 3590.8
Min nTPM: 816.9
Std nTPM: 463.5
Median nTPM: 1643.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3590.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2826.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2820.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2773.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2679.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2665.7
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2564.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2564.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2564.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2524.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2510.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2482.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2478.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2454.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 2431.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2394.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2379.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2349.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2341.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2324.1
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2255.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2172.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2165.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2157.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2153.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2137.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2106.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2098.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2084.1
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2081.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2062.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2060.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2055.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2028.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2024.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2020.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2018.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2018.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2007.2
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1997.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1993.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1978.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1970.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1970.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1967.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1966.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1936.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1930.5
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1924.5
GTEX-1192X-2526-SM-59868 50-59 years, male 1920.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1918.9
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1917.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1914.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1906.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1892.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1874.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1871.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1865.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1845.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1843.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1828.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1822.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1816.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1802.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1794.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1778.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1773.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1767.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1752.6
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1748.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1745.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1738.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1735.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 1729.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1721.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1720.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1719.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1718.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1717.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1716.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1709.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1700.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1699.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1690.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1668.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1666.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1666.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1663.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1663.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1662.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1660.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1654.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1654.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1643.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1631.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1626.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1620.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1611.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1582.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1580.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1569.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1565.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1562.1
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1561.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1554.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1547.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1533.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1530.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1524.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1523.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1516.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1508.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1503.4
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1501.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1498.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1493.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1493.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1491.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1484.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1463.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1457.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1451.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1448.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1445.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1443.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1443.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1431.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1430.6
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1415.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1414.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1412.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1385.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1379.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1376.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1360.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1352.4
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1352.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1348.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1347.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1330.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1329.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1317.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1314.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1304.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1302.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1298.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1277.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1258.5
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1258.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1257.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1236.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1228.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1227.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1225.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1217.9
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1214.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1213.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1210.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1192.7
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1190.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1188.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1185.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1183.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1175.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1150.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1150.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1138.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1132.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1119.6
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1102.3
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1068.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1040.2
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1036.8
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1027.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1023.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1016.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 979.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 960.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 948.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 938.6
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 929.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 918.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 916.1
GTEX-14PN3-2026-SM-68729 60-69 years, female 888.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 886.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 877.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 816.9
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 907.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 907.0
FF:10024-101D6 15,40,85 years, mixed 907.0

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