HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:332.5 nTPM
HPA:332.5 nTPM
GTEx:296.7 nTPM
FANTOM5:130.5 Scaled Tags Per Million
Pig:64.2 nTPM
Mouse:71.8 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041428Antibody HPA041722
Glial cells LowLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 332.5
Sample id Sample description nTPM
Hippocampus
nTPM: 323.2
2529 Female, age 94, left hemisphere 329.3
1898 Male, age 80, left hemisphere 328.8
1855 Male, age 76, left hemisphere 327.5
2621 Female, age 67, right hemisphere 323.7
1911 Female, age 85, right hemisphere 317.2
2148 Female, age 91, left hemisphere 312.4
Dentate gyrus
nTPM: 321.7
2530 Female, age 94, left hemisphere 337.7
2010 Male, age 76, both hemispheres 324.0
2246 Female, age 85, both hemispheres 321.2
2528 Male, age 74, both hemispheres 320.2
1927 Female, age 91, both hemispheres 319.3
2531 Female, age 67, both hemispheres 308.0
Entorhinal gyrus
nTPM: 331.0
2764 Male, age 80, right hemisphere 341.4
1938 Female, age 85, left hemisphere 338.9
1787 Male, age 76, left hemisphere 332.2
2117 Female, age 91, right hemisphere 331.5
2613 Female, age 94, left hemisphere 326.8
2686 Male, age 75, right hemisphere 315.4
Hippocampus, CA1
nTPM: 320.8
2749 Male, age 80, left hemisphere 338.4
2527 Male, age 74, both hemispheres 320.5
1873 Female, age 85, both hemispheres 318.4
2045 Male, age 76, both hemispheres 316.2
2082 Female, age 91, right hemisphere 310.4
Hippocampus, CA2
nTPM: 322.8
2249 Male, age 74, both hemispheres 332.8
1963 Male, age 80, left hemisphere 328.8
1892 Male, age 76, both hemispheres 323.4
2437 Female, age 94, left hemisphere 321.7
1940 Female, age 85, left hemisphere 319.0
2113 Female, age 91, right hemisphere 310.8
Hippocampus, CA3
nTPM: 313.2
1891 Female, age 85, both hemispheres 323.9
1867 Male, age 76, both hemispheres 319.8
2436 Male, age 74, both hemispheres 317.6
2137 Male, age 80, left hemisphere 313.0
2620 Female, age 94, left hemisphere 305.7
2861 Female, age 67, both hemispheres 299.3
Parahippocampal cortex
nTPM: 324.8
1850 Male, age 80, both hemispheres 337.0
1933 Female, age 85, both hemispheres 336.1
2532 Female, age 72, left hemisphere 333.5
1990 Female, age 91, right hemisphere 327.5
2250 Female, age 67, right hemisphere 325.1
2245 Female, age 91, both hemispheres 325.0
2692 Male, age 74, both hemispheres 321.5
2693 Female, age 94, both hemispheres 320.0
2018 Male, age 76, both hemispheres 319.7
2622 Female, age 67, right hemisphere 302.9
Perirhinal gyrus
nTPM: 332.5
1794 Male, age 80, right hemisphere 339.5
1847 Female, age 91, left hemisphere 333.8
1841 Female, age 85, right hemisphere 331.9
2848 Male, age 76, right hemisphere 329.5
2521 Female, age 94, right hemisphere 327.8
Subiculum
nTPM: 328.9
1977 Female, age 85, both hemispheres 341.2
2042 Male, age 76, both hemispheres 333.6
1901 Male, age 80, both hemispheres 329.9
2619 Male, age 74, both hemispheres 327.1
2438 Female, age 94, left hemisphere 326.1
2729 Female, age 91, right hemisphere 315.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 296.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 296.7
Samples: 197

Max nTPM: 567.1
Min nTPM: 138.6
Std nTPM: 69.1
Median nTPM: 288.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 567.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 560.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 473.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 466.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 465.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 463.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 460.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 431.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 422.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 410.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 410.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.5
FF:10169-103B7 60 years, female 134.9
FF:10153-102I9 76 years, female 126.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.2
Samples: 4

Max nTPM: 85.1
Min nTPM: 40.3
Sample A Female 85.1
Sample B Female 59.9
Sample C Male 71.4
Sample D Male 40.3
Entorhinal cortex
nTPM: 56.8
Samples: 4

Max nTPM: 61.6
Min nTPM: 46.1
Sample A Female 61.6
Sample B Female 59.9
Sample C Male 59.6
Sample D Male 46.1
Subiculum
nTPM: 63.4
Samples: 4

Max nTPM: 83.6
Min nTPM: 53.9
Sample A Female 83.6
Sample B Female 58.2
Sample C Male 57.7
Sample D Male 53.9
Ventral hippocampus
nTPM: 62.1
Samples: 4

Max nTPM: 74.0
Min nTPM: 46.3
Sample A Female 66.7
Sample B Female 46.3
Sample C Male 74.0
Sample D Male 61.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.9
Samples: 4

Max nTPM: 75.2
Min nTPM: 66.6
Sample A Male 66.6
Sample B Male 75.2
Sample C Female 70.8
Sample D Female 74.8
Hippocampal formation
nTPM: 67.7
Samples: 4

Max nTPM: 70.5
Min nTPM: 62.8
Sample A Male 70.3
Sample B Male 62.8
Sample C Female 67.0
Sample D Female 70.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
512765 Antisense, RP_040809_02_D03, Mouse strain C57BL/6J (56 days, male) 11.8
71764910 Antisense, RP_050926_02_A09, Mouse strain C57BL/6J (56 days, male) 0.1

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