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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:226.4 nTPM
FANTOM5:123.1 Scaled Tags Per Million
Pig:50.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041428Antibody HPA041722
Glial cells Not detectedLow
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 226.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 226.4
Samples: 246

Max nTPM: 518.0
Min nTPM: 101.3
Std nTPM: 50.3
Median nTPM: 221.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 518.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 414.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 407.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 388.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 375.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 371.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 351.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 331.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 318.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 317.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 313.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 313.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 306.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 303.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 300.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 297.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 296.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 291.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 287.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 284.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 283.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 283.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 282.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 280.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 278.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 277.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 275.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 275.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 275.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 274.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 274.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 273.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 272.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 269.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 269.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 269.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 269.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 269.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 268.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 268.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 266.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 266.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 266.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 266.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 266.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 265.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 262.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 261.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 261.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 260.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 258.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 257.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 257.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 257.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 256.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 256.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 254.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 253.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 251.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 251.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 251.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 250.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 249.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 249.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 248.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 248.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 248.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 247.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 247.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 246.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 244.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 243.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 242.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 241.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 241.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 240.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 240.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 239.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 238.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 238.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 237.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 237.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 235.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 235.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 235.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 234.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 234.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 234.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 234.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 234.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 233.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 231.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 231.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 231.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 231.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 230.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 229.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 229.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 229.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 229.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 229.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 228.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 228.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 227.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 227.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 227.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 226.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 225.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 225.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 225.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 225.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 225.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 224.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 224.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 223.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 223.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 223.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 223.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 222.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 222.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 222.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 221.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 221.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 221.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 220.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 218.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 218.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 218.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 217.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 217.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 217.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 216.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 215.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 215.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 215.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 214.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 214.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 214.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 214.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 213.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 213.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 213.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 212.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 211.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 210.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 210.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 209.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 209.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 209.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 208.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 208.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 208.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 207.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 207.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 207.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 207.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 206.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 204.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 204.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 202.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 201.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 201.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 201.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 201.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 200.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 200.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 199.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 199.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 198.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 198.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 198.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 197.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 196.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 196.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 195.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 194.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 194.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 194.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 194.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 194.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 194.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 193.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 193.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 193.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 193.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 193.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 192.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 192.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 192.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 191.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 191.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 191.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 191.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 191.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 190.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 190.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 190.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 189.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 189.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 189.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 188.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 188.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 188.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 188.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 187.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 186.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 186.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 185.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 185.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 185.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 185.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 182.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 182.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 181.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 181.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 179.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 179.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 177.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 177.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 176.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 174.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 174.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 171.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 169.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 169.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 166.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 160.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 158.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 156.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 156.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 154.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 150.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 149.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 148.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 147.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 136.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 114.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 105.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 101.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 123.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 123.1
FF:10164-103B2 76 years, female 123.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.5
Pig sample Sample description nTPM
Caudate
nTPM: 50.5
Samples: 4

Max nTPM: 55.8
Min nTPM: 43.3
Sample A Female 50.4
Sample B Female 52.5
Sample C Male 55.8
Sample D Male 43.3

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