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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:118.5 nTPM
FANTOM5:357.7 Scaled Tags Per Million
Pig:80.9 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA079430
Glial cells High
Neuronal cells Not detected

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 118.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 118.5
Samples: 246

Max nTPM: 237.2
Min nTPM: 56.7
Std nTPM: 31.7
Median nTPM: 118.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 237.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 198.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 190.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 185.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 185.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 181.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 180.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 180.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 179.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 179.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 176.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 175.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 175.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 169.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 169.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 169.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 169.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 169.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 168.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 168.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 166.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 166.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 165.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 163.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 163.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 161.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 161.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 160.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 157.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 157.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 153.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 153.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 152.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 152.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 151.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 150.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 150.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 150.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 150.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 148.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 148.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 147.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 147.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 145.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 145.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 145.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 144.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 143.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 143.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 143.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 143.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 143.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 142.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 141.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 141.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 140.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 138.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 138.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 138.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 138.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 138.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 138.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 137.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 136.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 136.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 136.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 135.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 135.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 135.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 134.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 134.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 134.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 134.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 134.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 133.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 132.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 132.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 131.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 130.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 130.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 130.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 130.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 129.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 129.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 129.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 129.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 128.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 128.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 127.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 127.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 126.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 126.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 125.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 123.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 123.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 122.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 121.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 121.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 120.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 120.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 119.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 119.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 119.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 119.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 119.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 119.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 118.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 118.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 118.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 118.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 118.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 117.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 117.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 116.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 115.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 115.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 114.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 114.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 113.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 113.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 112.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 111.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 111.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 110.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 110.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 110.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 110.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 109.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 109.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 108.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 108.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 106.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 106.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 104.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 104.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 104.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 104.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 103.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 103.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 101.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 101.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 101.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 100.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 99.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 98.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 98.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 98.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 97.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 96.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 96.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 96.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 96.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 96.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 95.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 93.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 92.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 91.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 91.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 90.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 90.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 90.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 90.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 89.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 89.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 88.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 87.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 87.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 86.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 86.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 86.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 86.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 86.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 85.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 84.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 84.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 84.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 83.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 83.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 83.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 83.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 83.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 83.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 82.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 80.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 80.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 80.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 80.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 80.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 79.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 78.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 77.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 77.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 76.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 74.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 71.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 70.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 70.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 69.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 69.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 68.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 67.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 66.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 65.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 56.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 357.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 357.7
FF:10164-103B2 76 years, female 357.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 80.9
Pig sample Sample description nTPM
Caudate
nTPM: 80.9
Samples: 4

Max nTPM: 100.5
Min nTPM: 66.6
Sample A Female 66.6
Sample B Female 82.3
Sample C Male 100.5
Sample D Male 74.0

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