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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:320.1 nTPM
FANTOM5:154.7 Scaled Tags Per Million
Pig:336.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA028970Antibody HPA028971
Glial cells LowMedium
Neuronal cells MediumNot detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 320.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 320.1
Samples: 246

Max nTPM: 706.7
Min nTPM: 77.4
Std nTPM: 119.6
Median nTPM: 321.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 706.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 655.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 630.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 608.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 590.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 582.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 581.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 572.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 561.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 553.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 549.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 542.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 525.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 518.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 512.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 506.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 500.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 498.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 489.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 486.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 486.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 484.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 479.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 477.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 475.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 474.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 473.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 469.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 468.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 462.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 461.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 454.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 453.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 450.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 449.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 443.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 442.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 440.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 435.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 434.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 432.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 432.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 431.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 425.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 421.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 420.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 417.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 416.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 412.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 408.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 408.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 407.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 407.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 406.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 406.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 400.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 400.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 399.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 399.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 398.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 398.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 395.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 395.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 394.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 392.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 390.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 389.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 388.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 387.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 384.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 380.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 377.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 374.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 369.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 369.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 368.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 367.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 367.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 367.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 366.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 366.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 364.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 364.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 364.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 363.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 359.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 359.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 354.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 353.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 350.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 350.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 350.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 349.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 347.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 346.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 344.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 343.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 343.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 341.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 339.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 339.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 338.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 337.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 336.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 336.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 335.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 334.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 334.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 334.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 332.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 332.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 332.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 332.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 331.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 330.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 329.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 329.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 326.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 325.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 324.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 323.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 321.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 321.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 321.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 320.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 318.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 317.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 314.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 313.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 312.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 312.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 308.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 307.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 307.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 306.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 306.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 306.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 305.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 304.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 303.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 302.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 302.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 299.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 299.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 298.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 298.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 293.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 293.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 289.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 288.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 287.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 287.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 286.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 284.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 284.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 282.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 281.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 279.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 279.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 279.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 279.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 277.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 275.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 273.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 273.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 273.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 271.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 269.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 269.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 267.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 262.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 258.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 257.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 255.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 254.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 254.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 254.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 253.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 248.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 247.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 245.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 242.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 238.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 233.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 233.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 232.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 228.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 226.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 226.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 225.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 225.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 222.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 214.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 214.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 213.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 213.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 212.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 208.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 207.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 204.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 202.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 198.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 195.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 193.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 192.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 190.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 187.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 187.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 186.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 183.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 180.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 180.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 176.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 168.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 167.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 164.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 162.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 157.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 156.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 154.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 151.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 150.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 149.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 148.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 146.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 140.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 137.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 132.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 132.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 130.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 128.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 126.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 126.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 126.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 125.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 124.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 115.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 99.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 98.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 98.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 92.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 77.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 154.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 154.7
FF:10164-103B2 76 years, female 154.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 336.6
Pig sample Sample description nTPM
Caudate
nTPM: 336.6
Samples: 4

Max nTPM: 384.0
Min nTPM: 299.5
Sample A Female 299.5
Sample B Female 342.9
Sample C Male 384.0
Sample D Male 319.8

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