HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:58.3 nTPM
HPA:58.3 nTPM
GTEx:69.6 nTPM
FANTOM5:82.5 Scaled Tags Per Million
Pig:41.6 nTPM
Mouse:74.8 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068786
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.3
Sample id Sample description nTPM
Hippocampus
nTPM: 50.1
1898 Male, age 80, left hemisphere 54.8
2621 Female, age 67, right hemisphere 52.8
2148 Female, age 91, left hemisphere 50.1
2529 Female, age 94, left hemisphere 49.9
1855 Male, age 76, left hemisphere 48.6
1911 Female, age 85, right hemisphere 44.6
Dentate gyrus
nTPM: 49.6
2010 Male, age 76, both hemispheres 52.4
1927 Female, age 91, both hemispheres 52.1
2531 Female, age 67, both hemispheres 52.0
2530 Female, age 94, left hemisphere 50.6
2246 Female, age 85, both hemispheres 47.1
2528 Male, age 74, both hemispheres 43.8
Entorhinal gyrus
nTPM: 52.2
2764 Male, age 80, right hemisphere 60.4
2613 Female, age 94, left hemisphere 54.7
1787 Male, age 76, left hemisphere 53.1
1938 Female, age 85, left hemisphere 52.7
2686 Male, age 75, right hemisphere 47.5
2117 Female, age 91, right hemisphere 44.7
Hippocampus, CA1
nTPM: 51.7
2749 Male, age 80, left hemisphere 63.9
2045 Male, age 76, both hemispheres 50.3
1873 Female, age 85, both hemispheres 49.9
2527 Male, age 74, both hemispheres 48.9
2082 Female, age 91, right hemisphere 45.3
Hippocampus, CA2
nTPM: 50.7
1892 Male, age 76, both hemispheres 56.7
2437 Female, age 94, left hemisphere 54.8
1963 Male, age 80, left hemisphere 52.9
1940 Female, age 85, left hemisphere 48.8
2113 Female, age 91, right hemisphere 47.0
2249 Male, age 74, both hemispheres 44.1
Hippocampus, CA3
nTPM: 51.3
2137 Male, age 80, left hemisphere 56.3
2861 Female, age 67, both hemispheres 53.2
1867 Male, age 76, both hemispheres 52.8
2620 Female, age 94, left hemisphere 52.6
1891 Female, age 85, both hemispheres 46.6
2436 Male, age 74, both hemispheres 46.4
Parahippocampal cortex
nTPM: 51.2
1850 Male, age 80, both hemispheres 58.8
1933 Female, age 85, both hemispheres 52.8
2245 Female, age 91, both hemispheres 52.5
2532 Female, age 72, left hemisphere 52.0
2622 Female, age 67, right hemisphere 51.3
1990 Female, age 91, right hemisphere 50.3
2018 Male, age 76, both hemispheres 50.2
2692 Male, age 74, both hemispheres 49.1
2693 Female, age 94, both hemispheres 48.0
2250 Female, age 67, right hemisphere 47.0
Perirhinal gyrus
nTPM: 58.3
1794 Male, age 80, right hemisphere 63.0
2521 Female, age 94, right hemisphere 59.4
1847 Female, age 91, left hemisphere 59.0
1841 Female, age 85, right hemisphere 55.9
2848 Male, age 76, right hemisphere 54.4
Subiculum
nTPM: 48.6
2438 Female, age 94, left hemisphere 52.5
1977 Female, age 85, both hemispheres 52.0
1901 Male, age 80, both hemispheres 50.6
2619 Male, age 74, both hemispheres 49.5
2729 Female, age 91, right hemisphere 43.8
2042 Male, age 76, both hemispheres 43.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.6
Samples: 197

Max nTPM: 152.6
Min nTPM: 27.9
Std nTPM: 23.4
Median nTPM: 64.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 152.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 142.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 137.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 134.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 126.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 125.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 123.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 115.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 114.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 113.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 112.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.5
FF:10169-103B7 60 years, female 95.2
FF:10153-102I9 76 years, female 69.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 51.8
Min nTPM: 33.3
Sample A Female 51.8
Sample B Female 39.5
Sample C Male 41.8
Sample D Male 33.3
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 39.5
Min nTPM: 32.6
Sample A Female 38.7
Sample B Female 36.7
Sample C Male 39.5
Sample D Male 32.6
Subiculum
nTPM: 35.5
Samples: 4

Max nTPM: 46.5
Min nTPM: 30.1
Sample A Female 46.5
Sample B Female 31.7
Sample C Male 33.8
Sample D Male 30.1
Ventral hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 27.9
Sample A Female 36.2
Sample B Female 27.9
Sample C Male 44.4
Sample D Male 45.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 74.7
Min nTPM: 69.4
Sample A Male 69.4
Sample B Male 74.7
Sample C Female 71.5
Sample D Female 74.4
Hippocampal formation
nTPM: 74.8
Samples: 4

Max nTPM: 83.1
Min nTPM: 67.9
Sample A Male 83.1
Sample B Male 73.1
Sample C Female 67.9
Sample D Female 74.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71992019 Antisense, RP_051012_04_A02, Mouse strain C57BL/6J (56 days, male) 4.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.