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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA043698
Pigment epithelial cells
Not detected
Photoreceptor cells
Not detected
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Low
Inner plexiform layer
Not detected
Ganglion cells
High
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 615.5
Min nTPM: 134.4
Std nTPM: 97.3
Median nTPM: 0.0
376_1
75 years, female
615.5
316_1
62 years, male
605.6
229_1
69 years, female
579.5
153_1
70 years, female
564.7
35_1
74 years, female
550.7
172_1
72 years, female
543.4
6_1
73 years, female
541.0
499_1
55 years, female
530.5
145_1
84 years, male
514.0
126_1
63 years, male
512.0
9_1
66 years, female
509.5
495_1
57 years, female
501.1
405_1
91 years, male
500.5
335_1
73 years, female
496.4
352_1
62 years, male
492.2
319_1
81 years, male
484.2
526_1
61 years, male
480.2
384_1
83 years, male
479.9
311_1
78 years, male
479.4
17_1
71 years, male
478.5
389_1
86 years, female
473.6
415_1
77 years, female
472.7
189_1
76 years, male
471.2
81_1
67 years, male
470.6
386_1
76 years, male
467.0
503_1
68 years, male
463.5
163_1
78 years, male
457.9
286_1
68 years, female
456.5
377_1
82 years, female
448.2
246_1
77 years, male
445.1
292_1
71 years, male
438.5
217_1
76 years, male
435.0
142_1
61 years, female
434.4
115_1
83 years, male
432.8
396_1
62 years, male
432.3
517_1
88 years, male
431.9
218_1
71 years, female
422.0
254_1
77 years, female
418.5
355_1
70 years, female
418.1
293_1
68 years, female
415.0
324_1
76 years, male
414.6
321_1
62 years, female
411.9
89_1
63 years, male
409.2
350_1
84 years, female
408.2
43_1
64 years, female
407.2
18_1
88 years, male
403.5
347_1
72 years, male
401.9
315_1
62 years, female
400.5
351_1
91 years, male
400.4
137_1
83 years, male
399.8
353_1
82 years, female
399.3
291_1
76 years, male
399.2
356_1
87 years, female
394.5
313_1
79 years, female
392.6
265_1
87 years, male
392.1
349_1
83 years, male
386.2
295_1
61 years, female
385.8
149_1
88 years, male
383.4
379_1
60 years, male
379.3
490_1
67 years, female
377.9
413_1
59 years, female
377.4
266_1
85 years, male
375.9
120_1
70 years, female
372.9
264_1
73 years, female
369.0
320_1
89 years, female
366.0
314_1
67 years, male
364.0
425_1
59 years, female
361.0
4_1
88 years, female
359.5
2_1
77 years, female
356.4
307_1
66 years, female
351.6
452_1
88 years, female
350.5
109_1
81 years, female
349.4
318_1
68 years, male
347.4
506_1
65 years, male
347.4
501_1
88 years, male
339.4
404_1
82 years, female
338.5
251_1
78 years, male
334.4
32_1
67 years, male
333.3
414_1
84 years, female
328.8
99_1
64 years, male
327.3
447_1
81 years, male
325.3
322_1
76 years, male
317.3
348_1
84 years, male
317.3
42_1
85 years, male
314.8
177_1
74 years, male
309.6
162_1
79 years, female
305.5
394_1
75 years, female
301.2
173_1
67 years, male
294.8
375_1
74 years, female
287.0
288_1
66 years, female
283.5
518_1
75 years, female
277.6
468_1
89 years, male
277.3
237_1
82 years, male
269.1
117_1
61 years, male
257.2
406_1
79 years, male
243.9
466_1
57 years, female
237.9
139_1
64 years, female
236.2
317_1
60 years, male
234.9
243_1
75 years, male
233.0
119_1
70 years, female
225.3
354_1
81 years, female
215.5
41_1
94 years, female
199.0
308_1
70 years, female
176.4
491_1
89 years, female
163.6
480_1
63 years, male
134.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.