HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:342.6 nTPM
HPA:342.6 nTPM
GTEx:301.7 nTPM
FANTOM5:195.5 Scaled Tags Per Million
Pig:247.4 nTPM
Mouse:516.8 nTPM
Allen mouse:16.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 342.6
Sample id Sample description nTPM
Hippocampus
nTPM: 319.2
1898 Male, age 80, left hemisphere 355.7
2621 Female, age 67, right hemisphere 321.0
1855 Male, age 76, left hemisphere 320.8
2148 Female, age 91, left hemisphere 316.6
1911 Female, age 85, right hemisphere 308.8
2529 Female, age 94, left hemisphere 292.5
Dentate gyrus
nTPM: 327.8
2530 Female, age 94, left hemisphere 361.9
1927 Female, age 91, both hemispheres 358.3
2010 Male, age 76, both hemispheres 327.1
2531 Female, age 67, both hemispheres 315.6
2246 Female, age 85, both hemispheres 302.7
2528 Male, age 74, both hemispheres 301.1
Entorhinal gyrus
nTPM: 315.8
2613 Female, age 94, left hemisphere 361.8
1938 Female, age 85, left hemisphere 322.4
2764 Male, age 80, right hemisphere 320.8
1787 Male, age 76, left hemisphere 305.5
2686 Male, age 75, right hemisphere 298.5
2117 Female, age 91, right hemisphere 286.2
Hippocampus, CA1
nTPM: 342.6
2749 Male, age 80, left hemisphere 450.5
1873 Female, age 85, both hemispheres 336.2
2045 Male, age 76, both hemispheres 315.0
2527 Male, age 74, both hemispheres 306.7
2082 Female, age 91, right hemisphere 304.8
Hippocampus, CA2
nTPM: 321.4
1963 Male, age 80, left hemisphere 363.8
1892 Male, age 76, both hemispheres 345.7
2437 Female, age 94, left hemisphere 323.3
2249 Male, age 74, both hemispheres 301.0
2113 Female, age 91, right hemisphere 298.8
1940 Female, age 85, left hemisphere 295.5
Hippocampus, CA3
nTPM: 329.9
2137 Male, age 80, left hemisphere 394.7
2620 Female, age 94, left hemisphere 343.6
2861 Female, age 67, both hemispheres 326.2
1867 Male, age 76, both hemispheres 323.7
2436 Male, age 74, both hemispheres 297.1
1891 Female, age 85, both hemispheres 294.1
Parahippocampal cortex
nTPM: 302.7
1850 Male, age 80, both hemispheres 315.1
1933 Female, age 85, both hemispheres 310.7
1990 Female, age 91, right hemisphere 309.1
2245 Female, age 91, both hemispheres 307.4
2693 Female, age 94, both hemispheres 305.8
2622 Female, age 67, right hemisphere 303.1
2250 Female, age 67, right hemisphere 298.1
2692 Male, age 74, both hemispheres 295.1
2018 Male, age 76, both hemispheres 292.4
2532 Female, age 72, left hemisphere 290.5
Perirhinal gyrus
nTPM: 316.4
1847 Female, age 91, left hemisphere 344.4
1794 Male, age 80, right hemisphere 324.6
1841 Female, age 85, right hemisphere 312.7
2521 Female, age 94, right hemisphere 312.6
2848 Male, age 76, right hemisphere 287.9
Subiculum
nTPM: 299.5
1901 Male, age 80, both hemispheres 328.4
1977 Female, age 85, both hemispheres 308.0
2042 Male, age 76, both hemispheres 294.6
2619 Male, age 74, both hemispheres 292.4
2438 Female, age 94, left hemisphere 287.9
2729 Female, age 91, right hemisphere 285.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 301.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 301.7
Samples: 197

Max nTPM: 843.3
Min nTPM: 86.3
Std nTPM: 131.4
Median nTPM: 280.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 843.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 615.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 602.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 595.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 594.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 577.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 561.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 546.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 532.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 524.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 524.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 195.5
FF:10169-103B7 60 years, female 258.4
FF:10153-102I9 76 years, female 132.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 247.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 238.3
Samples: 4

Max nTPM: 338.2
Min nTPM: 172.3
Sample A Female 338.2
Sample B Female 254.7
Sample C Male 187.9
Sample D Male 172.3
Entorhinal cortex
nTPM: 203.4
Samples: 4

Max nTPM: 223.6
Min nTPM: 178.8
Sample A Female 223.6
Sample B Female 194.7
Sample C Male 216.4
Sample D Male 178.8
Subiculum
nTPM: 196.2
Samples: 4

Max nTPM: 248.8
Min nTPM: 169.6
Sample A Female 248.8
Sample B Female 178.7
Sample C Male 187.6
Sample D Male 169.6
Ventral hippocampus
nTPM: 247.4
Samples: 4

Max nTPM: 300.0
Min nTPM: 155.5
Sample A Female 273.0
Sample B Female 155.5
Sample C Male 300.0
Sample D Male 261.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 516.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 469.1
Samples: 4

Max nTPM: 552.8
Min nTPM: 434.9
Sample A Male 441.1
Sample B Male 434.9
Sample C Female 447.5
Sample D Female 552.8
Hippocampal formation
nTPM: 516.8
Samples: 4

Max nTPM: 567.2
Min nTPM: 489.6
Sample A Male 509.6
Sample B Male 500.7
Sample C Female 567.2
Sample D Female 489.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.2
68667946 Antisense, RP_050203_01_B05, Mouse strain C57BL/6J (56 days, male) 16.2

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