HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:43.9 nTPM
HPA:43.9 nTPM
GTEx:66.6 nTPM
FANTOM5:30.7 Scaled Tags Per Million
Pig:124.9 nTPM
Mouse:108.1 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.9
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
2621 Female, age 67, right hemisphere 55.5
2148 Female, age 91, left hemisphere 48.7
1911 Female, age 85, right hemisphere 35.5
1855 Male, age 76, left hemisphere 35.4
2529 Female, age 94, left hemisphere 35.2
1898 Male, age 80, left hemisphere 34.2
Dentate gyrus
nTPM: 40.4
2530 Female, age 94, left hemisphere 50.7
2531 Female, age 67, both hemispheres 44.0
1927 Female, age 91, both hemispheres 43.5
2528 Male, age 74, both hemispheres 38.2
2246 Female, age 85, both hemispheres 36.0
2010 Male, age 76, both hemispheres 30.0
Entorhinal gyrus
nTPM: 43.9
2613 Female, age 94, left hemisphere 58.3
2686 Male, age 75, right hemisphere 46.9
1787 Male, age 76, left hemisphere 43.4
2764 Male, age 80, right hemisphere 40.4
1938 Female, age 85, left hemisphere 37.9
2117 Female, age 91, right hemisphere 36.4
Hippocampus, CA1
nTPM: 35.6
2749 Male, age 80, left hemisphere 48.1
2527 Male, age 74, both hemispheres 38.8
1873 Female, age 85, both hemispheres 35.4
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 27.6
Hippocampus, CA2
nTPM: 38.5
1963 Male, age 80, left hemisphere 47.8
2437 Female, age 94, left hemisphere 46.0
1892 Male, age 76, both hemispheres 43.1
1940 Female, age 85, left hemisphere 32.5
2113 Female, age 91, right hemisphere 31.4
2249 Male, age 74, both hemispheres 30.4
Hippocampus, CA3
nTPM: 39.1
2861 Female, age 67, both hemispheres 60.6
2620 Female, age 94, left hemisphere 47.0
2137 Male, age 80, left hemisphere 40.8
1867 Male, age 76, both hemispheres 32.2
1891 Female, age 85, both hemispheres 30.1
2436 Male, age 74, both hemispheres 24.0
Parahippocampal cortex
nTPM: 42.0
2622 Female, age 67, right hemisphere 58.3
2692 Male, age 74, both hemispheres 47.0
2245 Female, age 91, both hemispheres 45.5
2693 Female, age 94, both hemispheres 44.4
2532 Female, age 72, left hemisphere 43.4
2250 Female, age 67, right hemisphere 41.3
1990 Female, age 91, right hemisphere 37.7
1850 Male, age 80, both hemispheres 35.7
1933 Female, age 85, both hemispheres 33.9
2018 Male, age 76, both hemispheres 32.4
Perirhinal gyrus
nTPM: 38.8
1794 Male, age 80, right hemisphere 43.8
2848 Male, age 76, right hemisphere 40.1
2521 Female, age 94, right hemisphere 38.0
1847 Female, age 91, left hemisphere 36.5
1841 Female, age 85, right hemisphere 35.6
Subiculum
nTPM: 35.8
2619 Male, age 74, both hemispheres 44.1
2438 Female, age 94, left hemisphere 43.2
1901 Male, age 80, both hemispheres 34.6
1977 Female, age 85, both hemispheres 34.2
2729 Female, age 91, right hemisphere 31.5
2042 Male, age 76, both hemispheres 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.6
Samples: 197

Max nTPM: 125.7
Min nTPM: 8.1
Std nTPM: 18.8
Median nTPM: 62.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 125.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 120.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 115.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 108.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 107.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 102.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 101.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 100.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 99.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 99.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 98.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.7
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 97.6
Samples: 4

Max nTPM: 110.1
Min nTPM: 83.1
Sample A Female 109.7
Sample B Female 87.4
Sample C Male 110.1
Sample D Male 83.1
Entorhinal cortex
nTPM: 124.9
Samples: 4

Max nTPM: 135.9
Min nTPM: 106.2
Sample A Female 135.9
Sample B Female 106.2
Sample C Male 135.0
Sample D Male 122.5
Subiculum
nTPM: 87.9
Samples: 4

Max nTPM: 115.5
Min nTPM: 76.0
Sample A Female 115.5
Sample B Female 76.0
Sample C Male 84.0
Sample D Male 76.2
Ventral hippocampus
nTPM: 89.1
Samples: 4

Max nTPM: 111.6
Min nTPM: 64.3
Sample A Female 81.2
Sample B Female 64.3
Sample C Male 111.6
Sample D Male 99.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.1
Samples: 4

Max nTPM: 115.2
Min nTPM: 93.7
Sample A Male 115.2
Sample B Male 111.8
Sample C Female 111.6
Sample D Female 93.7
Hippocampal formation
nTPM: 86.6
Samples: 4

Max nTPM: 94.6
Min nTPM: 80.5
Sample A Male 94.6
Sample B Male 82.3
Sample C Female 80.5
Sample D Female 88.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70723375 Antisense, RP_050705_01_A07, Mouse strain C57BL/6J (56 days, male) 1.0
74750054 Antisense, RP_060220_05_F05, Mouse strain C57BL/6J (56 days, male) 0.4

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