HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:92.2 nTPM
HPA:92.2 nTPM
GTEx:109.6 nTPM
FANTOM5:54.9 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:11.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.2
Sample id Sample description nTPM
Hippocampus
nTPM: 92.2
2621 Female, age 67, right hemisphere 140.5
1855 Male, age 76, left hemisphere 100.3
2529 Female, age 94, left hemisphere 96.8
1898 Male, age 80, left hemisphere 86.8
2148 Female, age 91, left hemisphere 67.1
1911 Female, age 85, right hemisphere 61.6
Dentate gyrus
nTPM: 68.0
2530 Female, age 94, left hemisphere 103.7
2010 Male, age 76, both hemispheres 79.7
1927 Female, age 91, both hemispheres 73.9
2531 Female, age 67, both hemispheres 68.2
2528 Male, age 74, both hemispheres 47.8
2246 Female, age 85, both hemispheres 34.9
Entorhinal gyrus
nTPM: 35.9
2613 Female, age 94, left hemisphere 69.9
2686 Male, age 75, right hemisphere 35.9
2764 Male, age 80, right hemisphere 34.0
1787 Male, age 76, left hemisphere 30.0
1938 Female, age 85, left hemisphere 27.0
2117 Female, age 91, right hemisphere 18.7
Hippocampus, CA1
nTPM: 62.5
2749 Male, age 80, left hemisphere 97.9
2527 Male, age 74, both hemispheres 95.8
1873 Female, age 85, both hemispheres 60.8
2045 Male, age 76, both hemispheres 32.1
2082 Female, age 91, right hemisphere 26.1
Hippocampus, CA2
nTPM: 74.3
1963 Male, age 80, left hemisphere 205.7
2437 Female, age 94, left hemisphere 74.3
1892 Male, age 76, both hemispheres 55.8
2249 Male, age 74, both hemispheres 50.8
2113 Female, age 91, right hemisphere 44.8
1940 Female, age 85, left hemisphere 14.7
Hippocampus, CA3
nTPM: 57.1
2861 Female, age 67, both hemispheres 138.7
2137 Male, age 80, left hemisphere 84.1
2620 Female, age 94, left hemisphere 33.8
1867 Male, age 76, both hemispheres 32.4
2436 Male, age 74, both hemispheres 31.3
1891 Female, age 85, both hemispheres 22.0
Parahippocampal cortex
nTPM: 34.5
2245 Female, age 91, both hemispheres 81.9
2622 Female, age 67, right hemisphere 57.4
2018 Male, age 76, both hemispheres 42.5
2250 Female, age 67, right hemisphere 32.3
2692 Male, age 74, both hemispheres 31.0
2532 Female, age 72, left hemisphere 23.8
1850 Male, age 80, both hemispheres 20.5
1933 Female, age 85, both hemispheres 20.4
2693 Female, age 94, both hemispheres 17.6
1990 Female, age 91, right hemisphere 17.2
Perirhinal gyrus
nTPM: 20.4
1847 Female, age 91, left hemisphere 33.8
2521 Female, age 94, right hemisphere 21.9
1794 Male, age 80, right hemisphere 20.4
2848 Male, age 76, right hemisphere 14.3
1841 Female, age 85, right hemisphere 11.7
Subiculum
nTPM: 30.5
1901 Male, age 80, both hemispheres 37.0
2438 Female, age 94, left hemisphere 36.1
2042 Male, age 76, both hemispheres 34.3
2729 Female, age 91, right hemisphere 33.3
2619 Male, age 74, both hemispheres 31.6
1977 Female, age 85, both hemispheres 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.6
Samples: 197

Max nTPM: 435.1
Min nTPM: 5.8
Std nTPM: 73.7
Median nTPM: 96.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 435.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 362.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 341.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 320.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 306.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 299.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 298.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 290.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 277.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 263.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 260.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.9
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 14.1
Min nTPM: 5.4
Sample A Female 9.4
Sample B Female 8.3
Sample C Male 14.1
Sample D Male 5.4
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.6
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 10.9
Sample C Male 11.6
Sample D Male 10.0
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 12.5
Min nTPM: 6.1
Sample A Female 12.5
Sample B Female 7.3
Sample C Male 9.7
Sample D Male 6.1
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 16.0
Min nTPM: 7.5
Sample A Female 11.0
Sample B Female 7.5
Sample C Male 16.0
Sample D Male 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 11.5
Sample A Male 12.4
Sample B Male 11.6
Sample C Female 12.0
Sample D Female 11.5
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.4
Sample A Male 8.7
Sample B Male 11.6
Sample C Female 8.4
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69860427 Antisense, RP_050331_03_G02, Mouse strain C57BL/6J (56 days, male) 0.4

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