HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.5 nTPM
HPA:24.5 nTPM
GTEx:30.0 nTPM
FANTOM5:63.5 Scaled Tags Per Million
Pig:58.3 nTPM
Mouse:52.0 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022035Antibody HPA063619
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
2621 Female, age 67, right hemisphere 34.4
2148 Female, age 91, left hemisphere 19.1
2529 Female, age 94, left hemisphere 13.2
1855 Male, age 76, left hemisphere 10.6
1911 Female, age 85, right hemisphere 0.6
1898 Male, age 80, left hemisphere 0.0
Dentate gyrus
nTPM: 12.3
2531 Female, age 67, both hemispheres 59.9
2246 Female, age 85, both hemispheres 7.4
1927 Female, age 91, both hemispheres 3.6
2530 Female, age 94, left hemisphere 2.6
2528 Male, age 74, both hemispheres 0.3
2010 Male, age 76, both hemispheres 0.0
Entorhinal gyrus
nTPM: 7.6
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 16.1
2764 Male, age 80, right hemisphere 6.1
1787 Male, age 76, left hemisphere 1.6
1938 Female, age 85, left hemisphere 0.1
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 7.0
2045 Male, age 76, both hemispheres 21.8
2527 Male, age 74, both hemispheres 5.5
1873 Female, age 85, both hemispheres 4.2
2082 Female, age 91, right hemisphere 3.7
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 1.3
2113 Female, age 91, right hemisphere 8.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 24.5
2620 Female, age 94, left hemisphere 71.6
2861 Female, age 67, both hemispheres 64.9
2137 Male, age 80, left hemisphere 10.6
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 8.6
2622 Female, age 67, right hemisphere 36.1
2245 Female, age 91, both hemispheres 28.5
2693 Female, age 94, both hemispheres 10.1
2532 Female, age 72, left hemisphere 8.3
1850 Male, age 80, both hemispheres 3.0
2018 Male, age 76, both hemispheres 0.3
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 9.5
1794 Male, age 80, right hemisphere 16.2
2848 Male, age 76, right hemisphere 15.2
1841 Female, age 85, right hemisphere 9.7
1847 Female, age 91, left hemisphere 4.3
2521 Female, age 94, right hemisphere 2.1
Subiculum
nTPM: 0.6
2729 Female, age 91, right hemisphere 3.8
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 74.4
Min nTPM: 5.9
Std nTPM: 14.6
Median nTPM: 27.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 74.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 74.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 69.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 67.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 67.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 64.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 63.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 60.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 59.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 59.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 59.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.5
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 60.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.3
Samples: 4

Max nTPM: 72.3
Min nTPM: 32.7
Sample A Female 69.2
Sample B Female 72.3
Sample C Male 32.7
Sample D Male 58.9
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 47.7
Min nTPM: 36.8
Sample A Female 47.7
Sample B Female 36.8
Sample C Male 45.1
Sample D Male 37.7
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 43.1
Min nTPM: 24.9
Sample A Female 43.1
Sample B Female 26.7
Sample C Male 28.8
Sample D Male 24.9
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 64.6
Min nTPM: 31.2
Sample A Female 31.2
Sample B Female 38.5
Sample C Male 42.1
Sample D Male 64.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 49.1
Min nTPM: 43.4
Sample A Male 49.1
Sample B Male 43.4
Sample C Female 45.0
Sample D Female 45.3
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 54.9
Min nTPM: 47.8
Sample A Male 47.8
Sample B Male 54.9
Sample C Female 54.7
Sample D Female 50.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
69524515 Antisense, RP_050419_04_E04, Mouse strain C57BL/6J (56 days, male) 8.3
71250309 Antisense, RP_050419_04_E04, Mouse strain C57BL/6J (56 days, male) 8.2

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The Human Protein Atlas

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