HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:74.1 nTPM
HPA:74.1 nTPM
GTEx:68.2 nTPM
FANTOM5:37.7 Scaled Tags Per Million
Pig:62.1 nTPM
Mouse:116.9 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.1
Sample id Sample description nTPM
Hippocampus
nTPM: 71.9
1898 Male, age 80, left hemisphere 75.3
2529 Female, age 94, left hemisphere 72.8
1855 Male, age 76, left hemisphere 72.6
2621 Female, age 67, right hemisphere 70.9
2148 Female, age 91, left hemisphere 70.1
1911 Female, age 85, right hemisphere 69.8
Dentate gyrus
nTPM: 72.0
2530 Female, age 94, left hemisphere 75.9
2528 Male, age 74, both hemispheres 75.3
2010 Male, age 76, both hemispheres 72.9
2246 Female, age 85, both hemispheres 70.5
1927 Female, age 91, both hemispheres 70.1
2531 Female, age 67, both hemispheres 67.3
Entorhinal gyrus
nTPM: 72.6
2117 Female, age 91, right hemisphere 76.8
2764 Male, age 80, right hemisphere 74.4
1787 Male, age 76, left hemisphere 74.2
2613 Female, age 94, left hemisphere 71.7
1938 Female, age 85, left hemisphere 70.9
2686 Male, age 75, right hemisphere 67.6
Hippocampus, CA1
nTPM: 72.1
2749 Male, age 80, left hemisphere 75.0
2527 Male, age 74, both hemispheres 74.1
2082 Female, age 91, right hemisphere 71.4
1873 Female, age 85, both hemispheres 70.6
2045 Male, age 76, both hemispheres 69.3
Hippocampus, CA2
nTPM: 74.1
2249 Male, age 74, both hemispheres 79.7
1963 Male, age 80, left hemisphere 74.9
2437 Female, age 94, left hemisphere 74.3
1892 Male, age 76, both hemispheres 73.5
1940 Female, age 85, left hemisphere 71.4
2113 Female, age 91, right hemisphere 70.9
Hippocampus, CA3
nTPM: 73.3
2436 Male, age 74, both hemispheres 86.9
1867 Male, age 76, both hemispheres 72.6
1891 Female, age 85, both hemispheres 71.5
2137 Male, age 80, left hemisphere 70.9
2861 Female, age 67, both hemispheres 69.6
2620 Female, age 94, left hemisphere 68.5
Parahippocampal cortex
nTPM: 70.4
2250 Female, age 67, right hemisphere 75.2
1850 Male, age 80, both hemispheres 72.7
2018 Male, age 76, both hemispheres 71.1
1990 Female, age 91, right hemisphere 71.0
2245 Female, age 91, both hemispheres 70.4
1933 Female, age 85, both hemispheres 70.3
2692 Male, age 74, both hemispheres 70.3
2693 Female, age 94, both hemispheres 68.3
2622 Female, age 67, right hemisphere 68.2
2532 Female, age 72, left hemisphere 66.9
Perirhinal gyrus
nTPM: 72.9
1794 Male, age 80, right hemisphere 76.1
1847 Female, age 91, left hemisphere 74.5
1841 Female, age 85, right hemisphere 73.2
2848 Male, age 76, right hemisphere 71.2
2521 Female, age 94, right hemisphere 69.7
Subiculum
nTPM: 72.3
1977 Female, age 85, both hemispheres 75.0
2619 Male, age 74, both hemispheres 74.3
2729 Female, age 91, right hemisphere 72.7
1901 Male, age 80, both hemispheres 72.3
2042 Male, age 76, both hemispheres 70.7
2438 Female, age 94, left hemisphere 69.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.2
Samples: 197

Max nTPM: 111.5
Min nTPM: 37.9
Std nTPM: 12.6
Median nTPM: 66.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 111.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 110.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 109.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 105.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 102.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 97.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 96.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 95.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 93.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 91.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.7
FF:10153-102I9 76 years, female 40.0
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.2
Samples: 4

Max nTPM: 85.7
Min nTPM: 43.0
Sample A Female 85.7
Sample B Female 62.3
Sample C Male 57.6
Sample D Male 43.0
Entorhinal cortex
nTPM: 53.0
Samples: 4

Max nTPM: 61.4
Min nTPM: 36.9
Sample A Female 52.2
Sample B Female 61.4
Sample C Male 61.4
Sample D Male 36.9
Subiculum
nTPM: 53.0
Samples: 4

Max nTPM: 70.5
Min nTPM: 45.0
Sample A Female 70.5
Sample B Female 48.0
Sample C Male 45.0
Sample D Male 48.3
Ventral hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 70.9
Min nTPM: 42.7
Sample A Female 62.6
Sample B Female 42.7
Sample C Male 70.9
Sample D Male 57.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.6
Samples: 4

Max nTPM: 107.8
Min nTPM: 94.5
Sample A Male 94.5
Sample B Male 105.4
Sample C Female 106.6
Sample D Female 107.8
Hippocampal formation
nTPM: 116.9
Samples: 4

Max nTPM: 123.2
Min nTPM: 103.2
Sample A Male 123.2
Sample B Male 103.2
Sample C Female 120.2
Sample D Female 121.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68546386 Antisense, RP_050120_02_D07, Mouse strain C57BL/6J (56 days, male) 1.8

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