We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PON2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • PON2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:224.8 nTPM
FANTOM5:362.2 Scaled Tags Per Million
Pig:50.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029193Antibody CAB025430
Glial cells HighHigh
Neuronal cells LowMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 224.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 224.8
Samples: 246

Max nTPM: 561.7
Min nTPM: 36.1
Std nTPM: 82.2
Median nTPM: 212.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 561.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 481.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 437.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 408.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 400.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 395.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 395.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 393.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 391.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 388.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 374.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 372.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 369.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 365.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 364.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 363.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 360.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 357.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 356.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 356.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 354.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 351.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 350.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 345.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 345.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 343.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 340.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 338.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 337.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 333.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 332.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 328.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 323.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 323.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 323.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 321.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 320.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 320.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 316.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 315.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 315.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 315.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 314.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 310.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 299.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 299.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 297.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 295.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 294.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 293.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 289.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 288.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 287.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 285.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 285.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 281.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 279.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 278.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 277.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 275.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 274.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 273.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 271.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 271.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 270.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 269.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 269.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 268.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 268.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 267.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 265.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 265.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 264.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 263.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 260.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 260.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 259.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 251.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 250.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 249.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 249.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 246.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 245.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 243.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 243.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 242.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 241.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 240.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 240.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 238.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 238.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 236.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 236.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 235.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 235.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 234.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 233.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 232.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 230.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 227.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 227.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 227.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 225.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 225.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 222.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 222.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 222.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 221.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 219.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 219.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 219.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 218.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 218.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 217.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 217.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 216.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 215.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 215.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 215.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 214.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 213.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 212.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 212.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 211.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 211.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 210.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 210.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 209.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 209.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 208.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 208.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 207.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 207.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 207.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 206.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 206.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 205.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 201.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 201.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 200.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 199.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 198.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 198.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 196.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 195.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 193.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 191.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 191.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 190.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 188.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 188.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 187.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 186.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 186.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 186.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 185.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 185.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 185.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 184.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 184.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 183.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 183.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 183.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 182.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 181.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 180.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 180.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 180.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 180.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 176.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 175.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 175.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 175.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 175.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 174.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 173.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 173.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 169.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 169.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 169.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 168.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 167.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 167.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 167.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 164.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 163.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 163.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 162.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 160.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 157.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 156.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 155.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 155.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 153.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 151.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 149.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 148.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 147.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 147.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 144.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 144.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 144.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 143.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 142.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 142.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 141.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 141.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 141.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 139.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 139.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 139.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 139.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 136.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 136.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 136.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 135.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 135.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 135.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 135.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 133.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 132.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 129.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 128.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 126.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 125.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 123.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 123.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 117.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 112.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 100.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 92.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 89.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 78.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 70.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 66.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 64.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.1
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 362.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 362.2
FF:10164-103B2 76 years, female 362.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.0
Pig sample Sample description nTPM
Caudate
nTPM: 50.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 47.4
Sample A Female 48.2
Sample B Female 49.2
Sample C Male 55.3
Sample D Male 47.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.