HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:79.5 nTPM
HPA:79.5 nTPM
GTEx:74.7 nTPM
FANTOM5:159.1 Scaled Tags Per Million
Pig:129.6 nTPM
Mouse:218.9 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019735
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.5
Sample id Sample description nTPM
Hippocampus
nTPM: 68.6
1855 Male, age 76, left hemisphere 77.7
1898 Male, age 80, left hemisphere 75.0
2621 Female, age 67, right hemisphere 71.4
2148 Female, age 91, left hemisphere 69.0
2529 Female, age 94, left hemisphere 59.8
1911 Female, age 85, right hemisphere 58.9
Dentate gyrus
nTPM: 68.7
2530 Female, age 94, left hemisphere 76.7
2246 Female, age 85, both hemispheres 73.4
1927 Female, age 91, both hemispheres 72.7
2010 Male, age 76, both hemispheres 71.5
2531 Female, age 67, both hemispheres 59.3
2528 Male, age 74, both hemispheres 58.6
Entorhinal gyrus
nTPM: 67.2
2613 Female, age 94, left hemisphere 78.8
1938 Female, age 85, left hemisphere 74.1
2764 Male, age 80, right hemisphere 71.2
1787 Male, age 76, left hemisphere 69.2
2117 Female, age 91, right hemisphere 59.4
2686 Male, age 75, right hemisphere 50.4
Hippocampus, CA1
nTPM: 79.5
2749 Male, age 80, left hemisphere 116.7
2045 Male, age 76, both hemispheres 81.0
1873 Female, age 85, both hemispheres 77.3
2082 Female, age 91, right hemisphere 62.5
2527 Male, age 74, both hemispheres 59.9
Hippocampus, CA2
nTPM: 66.9
1963 Male, age 80, left hemisphere 80.5
1892 Male, age 76, both hemispheres 76.6
1940 Female, age 85, left hemisphere 62.3
2437 Female, age 94, left hemisphere 61.7
2249 Male, age 74, both hemispheres 60.7
2113 Female, age 91, right hemisphere 59.6
Hippocampus, CA3
nTPM: 72.5
2137 Male, age 80, left hemisphere 98.0
2620 Female, age 94, left hemisphere 78.3
1867 Male, age 76, both hemispheres 72.0
2861 Female, age 67, both hemispheres 68.8
2436 Male, age 74, both hemispheres 61.5
1891 Female, age 85, both hemispheres 56.6
Parahippocampal cortex
nTPM: 65.3
2245 Female, age 91, both hemispheres 81.3
2250 Female, age 67, right hemisphere 73.2
2532 Female, age 72, left hemisphere 70.2
1850 Male, age 80, both hemispheres 67.1
1933 Female, age 85, both hemispheres 65.4
2018 Male, age 76, both hemispheres 64.1
1990 Female, age 91, right hemisphere 59.5
2622 Female, age 67, right hemisphere 59.0
2693 Female, age 94, both hemispheres 58.9
2692 Male, age 74, both hemispheres 54.6
Perirhinal gyrus
nTPM: 73.6
1847 Female, age 91, left hemisphere 84.7
1794 Male, age 80, right hemisphere 75.1
1841 Female, age 85, right hemisphere 72.5
2521 Female, age 94, right hemisphere 72.5
2848 Male, age 76, right hemisphere 63.3
Subiculum
nTPM: 61.1
1977 Female, age 85, both hemispheres 66.7
2619 Male, age 74, both hemispheres 66.1
1901 Male, age 80, both hemispheres 62.5
2042 Male, age 76, both hemispheres 59.1
2729 Female, age 91, right hemisphere 56.3
2438 Female, age 94, left hemisphere 55.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.7
Samples: 197

Max nTPM: 152.5
Min nTPM: 21.0
Std nTPM: 26.4
Median nTPM: 73.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 152.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 151.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 138.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 136.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 131.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 128.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 124.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 120.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 120.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 118.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 116.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.1
FF:10169-103B7 60 years, female 182.0
FF:10153-102I9 76 years, female 136.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 129.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 129.6
Samples: 4

Max nTPM: 164.1
Min nTPM: 105.0
Sample A Female 164.1
Sample B Female 141.8
Sample C Male 105.0
Sample D Male 107.5
Entorhinal cortex
nTPM: 122.2
Samples: 4

Max nTPM: 135.8
Min nTPM: 100.4
Sample A Female 126.0
Sample B Female 135.8
Sample C Male 126.4
Sample D Male 100.4
Subiculum
nTPM: 123.2
Samples: 4

Max nTPM: 155.1
Min nTPM: 110.2
Sample A Female 155.1
Sample B Female 116.4
Sample C Male 111.2
Sample D Male 110.2
Ventral hippocampus
nTPM: 119.7
Samples: 4

Max nTPM: 131.6
Min nTPM: 97.8
Sample A Female 131.6
Sample B Female 97.8
Sample C Male 125.0
Sample D Male 124.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 218.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 218.9
Samples: 4

Max nTPM: 234.3
Min nTPM: 206.8
Sample A Male 206.8
Sample B Male 226.6
Sample C Female 207.9
Sample D Female 234.3
Hippocampal formation
nTPM: 203.6
Samples: 4

Max nTPM: 221.9
Min nTPM: 185.3
Sample A Male 221.9
Sample B Male 199.6
Sample C Female 207.5
Sample D Female 185.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
2412 Antisense, RP_Baylor_102813, Mouse strain C57BL/6J (56 days, male) 16.0
2411 Antisense, RP_Baylor_102813, Mouse strain C57BL/6J (56 days, male) 5.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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