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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:88.8 nTPM
FANTOM5:179.6 Scaled Tags Per Million
Pig:134.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019735
Glial cells Not detected
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 88.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 88.8
Samples: 246

Max nTPM: 276.9
Min nTPM: 35.2
Std nTPM: 32.6
Median nTPM: 85.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 276.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 170.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 170.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 168.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 163.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 159.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 154.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 152.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 149.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 146.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 144.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 143.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 141.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 141.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 140.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 140.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 139.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 139.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 138.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 137.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 135.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 134.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 132.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 131.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 128.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 128.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 127.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 127.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 125.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 124.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 123.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 123.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 123.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 122.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 121.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 121.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 119.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 119.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 118.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 117.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 117.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 116.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 115.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 114.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 113.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 112.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 111.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 110.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 110.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 108.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 107.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 107.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 106.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 106.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 106.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 106.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 105.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 104.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 103.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 103.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 102.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 102.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 101.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 101.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 100.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 100.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 100.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 100.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 99.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 99.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 98.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 98.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 97.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 97.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 97.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 96.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 96.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 95.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 95.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 95.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 93.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 92.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 92.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 92.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 91.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 91.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 91.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 91.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 90.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 90.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 90.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 89.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 88.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 88.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 88.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 87.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 87.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 87.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 86.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 86.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 86.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 86.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 85.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 85.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 85.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 85.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 85.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 84.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 84.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 82.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 81.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 81.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 80.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 80.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 80.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 79.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 77.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 75.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 74.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 74.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 74.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 73.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 71.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 71.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 71.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 71.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 70.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 70.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 70.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 69.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 68.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 68.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 68.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 68.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 67.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 66.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 66.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 66.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 65.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 64.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 60.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 60.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 59.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 58.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 58.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 57.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 57.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 56.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 56.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 55.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 55.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 55.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 54.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 52.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 50.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 50.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 49.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 48.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 47.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 46.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 45.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 43.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 42.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 41.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 39.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 35.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 35.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 179.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 179.6
FF:10164-103B2 76 years, female 179.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 134.1
Pig sample Sample description nTPM
Caudate
nTPM: 134.1
Samples: 4

Max nTPM: 154.9
Min nTPM: 123.3
Sample A Female 123.3
Sample B Female 132.1
Sample C Male 154.9
Sample D Male 125.9

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