COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:103.7 nTPM
HPA:50.7 nTPM
GTEx:103.7 nTPM
FANTOM5:41.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA024258Antibody HPA058593Antibody CAB004670
Endothelial cells Not detectedLow-
Glandular cells LowMediumNot detected
Peripheral nerve/ganglion LowMedium-






COLON - HPA RNA-seqi
Average nTPM 50.7
overview
Male, age 54 		Colon sample 67
nTPM: 52.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 52
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 47.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 65.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 51.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 68.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 42.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 41.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 50.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 49.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 41.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 46.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 48.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 103.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 103.7
Samples: 373

Max nTPM: 349.8
Min nTPM: 41.7
Std nTPM: 29.6
Median nTPM: 100.8
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 349.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 289.5
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 217.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 204.8
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 194.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 193.5
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 191.9
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 191.1
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 171.9
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 170.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 166.8
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Colon - Transverse
Average nTPM: 72.7
Samples: 406

Max nTPM: 237.5
Min nTPM: 39.3
Std nTPM: 24.5
Median nTPM: 66.3
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 237.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 177.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 158.2
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 147.3
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 141.8
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 140.9
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 139.1
GTEX-17F96-2026-SM-79ON4 70-79 years, male 129.7
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 124.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 121.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 120.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 41.1
FF:10014-101C5 62,83,84 years, mixed 41.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.