COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.8 nTPM
HPA:1.5 nTPM
GTEx:13.8 nTPM
FANTOM5:11.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA062707
Endothelial cells High
Glandular cells Not detected


COLON - HPA RNA-seqi
Average nTPM 1.5
overview
Male, age 54 		Colon sample 67
nTPM: 2.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 1.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 1.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.8
Samples: 373

Max nTPM: 38.5
Min nTPM: 0.1
Std nTPM: 6.5
Median nTPM: 12.9
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 38.5
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 37.2
GTEX-1HSMO-2526-SM-A9SKP 60-69 years, male 35.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 35.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 34.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 34.4
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 32.7
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 32.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 32.4
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 31.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 29.9
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Colon - Transverse
Average nTPM: 6.6
Samples: 406

Max nTPM: 44.5
Min nTPM: 0.0
Std nTPM: 6.5
Median nTPM: 4.8
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 44.5
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 36.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 33.9
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 31.4
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 27.0
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 26.7
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 25.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 25.1
GTEX-18D9B-2526-SM-718BN 60-69 years, male 22.8
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 22.3
GTEX-1JJE9-2426-SM-D3L8T 70-79 years, male 21.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 11.1
FF:10014-101C5 62,83,84 years, mixed 11.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.