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CHCHD2
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  • CHCHD2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:350.2 nTPM
FANTOM5:118.6 Scaled Tags Per Million
Pig:87.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027407Antibody HPA052510
Glial cells LowLow
Neuronal cells HighMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 350.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 350.2
Samples: 246

Max nTPM: 939.1
Min nTPM: 198.0
Std nTPM: 98.0
Median nTPM: 335.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 939.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 814.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 757.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 751.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 683.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 622.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 621.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 618.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 575.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 544.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 533.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 514.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 506.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 506.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 501.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 500.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 484.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 469.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 467.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 464.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 463.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 463.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 461.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 458.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 457.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 457.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 453.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 448.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 438.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 431.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 430.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 430.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 427.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 424.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 417.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 415.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 415.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 413.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 412.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 411.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 408.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 406.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 406.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 405.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 403.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 402.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 401.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 394.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 393.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 392.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 389.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 388.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 388.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 387.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 385.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 385.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 382.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 382.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 381.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 381.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 378.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 378.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 377.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 376.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 374.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 374.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 373.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 373.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 373.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 373.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 372.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 372.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 370.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 370.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 369.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 367.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 366.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 366.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 365.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 363.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 363.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 363.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 362.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 362.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 360.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 360.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 359.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 359.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 357.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 356.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 356.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 355.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 355.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 354.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 354.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 354.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 353.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 353.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 353.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 352.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 352.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 351.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 351.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 350.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 350.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 350.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 349.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 349.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 347.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 347.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 346.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 345.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 343.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 343.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 342.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 341.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 341.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 339.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 339.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 337.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 337.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 337.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 335.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 335.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 334.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 333.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 333.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 332.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 332.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 331.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 330.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 328.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 327.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 324.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 324.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 323.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 323.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 322.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 321.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 320.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 320.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 320.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 320.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 319.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 318.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 317.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 316.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 316.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 315.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 315.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 314.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 312.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 311.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 311.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 311.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 311.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 308.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 307.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 307.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 306.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 306.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 305.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 304.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 303.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 302.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 301.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 301.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 300.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 299.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 299.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 298.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 298.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 298.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 297.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 297.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 297.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 296.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 296.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 296.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 296.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 294.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 292.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 292.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 291.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 291.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 290.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 289.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 289.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 289.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 288.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 287.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 286.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 286.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 286.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 285.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 280.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 280.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 279.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 279.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 278.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 277.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 276.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 276.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 275.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 275.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 273.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 272.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 271.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 270.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 270.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 270.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 268.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 267.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 267.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 266.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 266.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 264.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 263.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 263.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 262.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 261.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 257.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 256.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 253.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 252.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 252.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 249.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 249.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 249.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 246.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 246.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 244.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 242.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 241.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 239.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 236.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 229.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 228.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 223.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 223.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 219.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 218.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 217.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 217.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 206.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 198.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 118.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 118.6
FF:10164-103B2 76 years, female 118.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.2
Pig sample Sample description nTPM
Caudate
nTPM: 87.2
Samples: 4

Max nTPM: 98.3
Min nTPM: 73.4
Sample A Female 73.4
Sample B Female 98.3
Sample C Male 96.8
Sample D Male 80.3

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