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HSPB1
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  • HSPB1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:470.0 nTPM
FANTOM5:810.8 Scaled Tags Per Million
Pig:99.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA000497Antibody CAB004439Antibody CAB047331
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedMediumNot detected






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 470.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 470.0
Samples: 246

Max nTPM: 6891.9
Min nTPM: 44.4
Std nTPM: 746.3
Median nTPM: 252.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6891.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5206.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4918.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 3936.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 2818.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2111.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2089.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1944.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1901.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1791.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1639.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1593.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1530.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1400.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1387.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1342.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1331.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1329.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1268.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1261.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1128.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 993.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 973.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 971.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 969.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 955.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 952.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 928.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 914.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 838.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 827.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 789.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 705.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 687.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 671.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 670.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 649.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 642.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 612.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 612.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 568.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 566.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 561.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 552.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 551.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 548.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 548.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 545.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 538.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 520.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 509.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 496.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 482.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 477.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 460.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 459.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 454.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 449.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 445.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 429.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 419.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 416.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 416.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 403.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 402.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 396.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 389.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 389.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 386.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 381.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 370.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 366.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 360.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 356.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 351.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 350.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 347.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 346.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 345.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 344.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 342.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 341.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 329.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 329.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 328.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 328.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 311.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 311.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 308.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 306.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 304.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 304.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 301.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 299.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 297.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 295.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 294.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 293.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 292.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 287.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 287.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 286.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 280.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 280.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 279.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 274.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 272.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 272.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 270.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 268.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 268.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 266.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 263.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 262.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 258.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 258.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 257.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 257.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 256.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 254.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 253.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 253.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 250.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 249.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 249.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 245.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 244.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 244.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 240.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 240.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 239.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 238.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 237.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 236.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 235.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 234.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 233.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 231.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 228.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 226.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 226.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 226.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 225.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 223.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 222.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 222.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 221.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 220.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 220.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 218.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 218.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 216.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 215.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 215.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 213.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 212.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 211.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 207.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 207.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 204.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 203.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 203.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 202.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 200.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 196.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 194.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 191.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 190.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 189.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 188.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 187.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 186.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 186.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 184.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 183.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 183.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 183.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 183.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 182.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 181.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 180.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 178.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 177.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 175.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 173.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 170.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 169.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 168.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 168.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 166.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 166.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 165.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 163.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 162.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 161.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 159.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 159.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 158.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 158.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 155.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 154.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 154.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 154.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 152.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 148.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 145.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 145.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 144.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 142.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 142.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 135.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 134.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 134.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 132.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 131.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 131.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 128.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 127.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 125.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 124.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 123.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 119.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 118.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 117.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 115.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 112.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 105.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 95.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 94.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 88.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 85.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 44.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 810.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 810.8
FF:10164-103B2 76 years, female 810.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 99.8
Pig sample Sample description nTPM
Caudate
nTPM: 99.8
Samples: 4

Max nTPM: 123.0
Min nTPM: 83.5
Sample A Female 83.5
Sample B Female 123.0
Sample C Male 107.5
Sample D Male 85.1

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