HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:16.7 nTPM
FANTOM5:88.7 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:12.1 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006672
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
2529 Female, age 94, left hemisphere 16.7
2621 Female, age 67, right hemisphere 15.9
1911 Female, age 85, right hemisphere 10.7
2148 Female, age 91, left hemisphere 10.5
1898 Male, age 80, left hemisphere 9.6
1855 Male, age 76, left hemisphere 7.5
Dentate gyrus
nTPM: 9.1
2530 Female, age 94, left hemisphere 19.2
2531 Female, age 67, both hemispheres 10.6
2246 Female, age 85, both hemispheres 8.2
2010 Male, age 76, both hemispheres 7.7
1927 Female, age 91, both hemispheres 5.4
2528 Male, age 74, both hemispheres 3.3
Entorhinal gyrus
nTPM: 14.3
2686 Male, age 75, right hemisphere 26.8
2613 Female, age 94, left hemisphere 14.1
2764 Male, age 80, right hemisphere 13.0
2117 Female, age 91, right hemisphere 12.7
1938 Female, age 85, left hemisphere 10.6
1787 Male, age 76, left hemisphere 8.5
Hippocampus, CA1
nTPM: 6.7
1873 Female, age 85, both hemispheres 8.5
2527 Male, age 74, both hemispheres 8.0
2045 Male, age 76, both hemispheres 6.7
2082 Female, age 91, right hemisphere 6.1
2749 Male, age 80, left hemisphere 4.4
Hippocampus, CA2
nTPM: 8.4
1963 Male, age 80, left hemisphere 14.7
2437 Female, age 94, left hemisphere 11.4
1892 Male, age 76, both hemispheres 8.7
2113 Female, age 91, right hemisphere 5.6
1940 Female, age 85, left hemisphere 5.4
2249 Male, age 74, both hemispheres 4.6
Hippocampus, CA3
nTPM: 7.9
1891 Female, age 85, both hemispheres 12.5
2861 Female, age 67, both hemispheres 11.9
2620 Female, age 94, left hemisphere 9.7
1867 Male, age 76, both hemispheres 7.4
2436 Male, age 74, both hemispheres 3.5
2137 Male, age 80, left hemisphere 2.5
Parahippocampal cortex
nTPM: 10.3
2532 Female, age 72, left hemisphere 17.6
2692 Male, age 74, both hemispheres 16.5
2622 Female, age 67, right hemisphere 14.9
1850 Male, age 80, both hemispheres 12.7
2018 Male, age 76, both hemispheres 9.6
2245 Female, age 91, both hemispheres 7.7
1990 Female, age 91, right hemisphere 7.4
2693 Female, age 94, both hemispheres 6.4
1933 Female, age 85, both hemispheres 6.0
2250 Female, age 67, right hemisphere 3.9
Perirhinal gyrus
nTPM: 9.0
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 8.8
1841 Female, age 85, right hemisphere 8.6
1847 Female, age 91, left hemisphere 7.6
2521 Female, age 94, right hemisphere 6.3
Subiculum
nTPM: 14.4
2438 Female, age 94, left hemisphere 23.2
1901 Male, age 80, both hemispheres 15.0
2042 Male, age 76, both hemispheres 14.5
2619 Male, age 74, both hemispheres 14.2
1977 Female, age 85, both hemispheres 11.7
2729 Female, age 91, right hemisphere 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 38.9
Min nTPM: 6.2
Std nTPM: 5.8
Median nTPM: 15.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 33.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 30.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 29.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 29.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.7
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 79.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 25.3
Min nTPM: 15.7
Sample A Female 25.3
Sample B Female 23.1
Sample C Male 23.8
Sample D Male 15.7
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 18.5
Sample A Female 22.4
Sample B Female 20.6
Sample C Male 22.0
Sample D Male 18.5
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.1
Sample A Female 27.1
Sample B Female 19.1
Sample C Male 20.9
Sample D Male 18.1
Ventral hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 16.9
Sample A Female 21.6
Sample B Female 16.9
Sample C Male 24.4
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 11.4
Sample C Female 11.9
Sample D Female 14.2
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.0
Sample A Male 10.0
Sample B Male 13.2
Sample C Female 12.7
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
70430772 Antisense, RP_050614_02_A05, Mouse strain C57BL/6J (56 days, male) 7.6

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