HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.3 nTPM
HPA:31.3 nTPM
GTEx:37.3 nTPM
FANTOM5:10.9 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:31.2 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
2621 Female, age 67, right hemisphere 32.9
2148 Female, age 91, left hemisphere 27.7
2529 Female, age 94, left hemisphere 27.3
1898 Male, age 80, left hemisphere 26.9
1855 Male, age 76, left hemisphere 26.8
1911 Female, age 85, right hemisphere 25.8
Dentate gyrus
nTPM: 27.0
2531 Female, age 67, both hemispheres 32.0
2530 Female, age 94, left hemisphere 27.4
1927 Female, age 91, both hemispheres 27.2
2246 Female, age 85, both hemispheres 26.8
2528 Male, age 74, both hemispheres 24.9
2010 Male, age 76, both hemispheres 23.6
Entorhinal gyrus
nTPM: 29.0
2613 Female, age 94, left hemisphere 34.4
1787 Male, age 76, left hemisphere 30.9
1938 Female, age 85, left hemisphere 29.9
2764 Male, age 80, right hemisphere 28.6
2686 Male, age 75, right hemisphere 28.1
2117 Female, age 91, right hemisphere 21.8
Hippocampus, CA1
nTPM: 28.4
2749 Male, age 80, left hemisphere 31.5
2045 Male, age 76, both hemispheres 29.5
2082 Female, age 91, right hemisphere 28.3
2527 Male, age 74, both hemispheres 26.7
1873 Female, age 85, both hemispheres 26.2
Hippocampus, CA2
nTPM: 26.7
1892 Male, age 76, both hemispheres 28.9
2437 Female, age 94, left hemisphere 28.4
1940 Female, age 85, left hemisphere 27.4
2113 Female, age 91, right hemisphere 26.5
1963 Male, age 80, left hemisphere 25.8
2249 Male, age 74, both hemispheres 23.3
Hippocampus, CA3
nTPM: 29.6
2620 Female, age 94, left hemisphere 37.3
2861 Female, age 67, both hemispheres 34.1
2137 Male, age 80, left hemisphere 33.0
2436 Male, age 74, both hemispheres 27.0
1891 Female, age 85, both hemispheres 23.3
1867 Male, age 76, both hemispheres 23.1
Parahippocampal cortex
nTPM: 29.5
2622 Female, age 67, right hemisphere 34.4
2532 Female, age 72, left hemisphere 30.9
2245 Female, age 91, both hemispheres 30.5
2692 Male, age 74, both hemispheres 29.2
2693 Female, age 94, both hemispheres 29.1
1933 Female, age 85, both hemispheres 29.0
1850 Male, age 80, both hemispheres 28.7
2250 Female, age 67, right hemisphere 28.3
2018 Male, age 76, both hemispheres 28.0
1990 Female, age 91, right hemisphere 26.5
Perirhinal gyrus
nTPM: 31.3
1794 Male, age 80, right hemisphere 32.4
1847 Female, age 91, left hemisphere 31.9
2521 Female, age 94, right hemisphere 31.3
2848 Male, age 76, right hemisphere 31.1
1841 Female, age 85, right hemisphere 29.5
Subiculum
nTPM: 24.1
2619 Male, age 74, both hemispheres 27.2
1977 Female, age 85, both hemispheres 26.1
2729 Female, age 91, right hemisphere 23.7
1901 Male, age 80, both hemispheres 23.2
2438 Female, age 94, left hemisphere 22.9
2042 Male, age 76, both hemispheres 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.3
Samples: 197

Max nTPM: 108.4
Min nTPM: 15.2
Std nTPM: 13.2
Median nTPM: 35.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 108.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 68.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 66.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 66.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 63.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 60.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 59.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 58.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.9
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 32.7
Min nTPM: 21.5
Sample A Female 32.7
Sample B Female 26.7
Sample C Male 25.8
Sample D Male 21.5
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 25.8
Sample A Female 30.9
Sample B Female 25.8
Sample C Male 32.6
Sample D Male 25.8
Subiculum
nTPM: 26.4
Samples: 4

Max nTPM: 34.8
Min nTPM: 21.7
Sample A Female 34.8
Sample B Female 22.6
Sample C Male 26.4
Sample D Male 21.7
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 34.8
Min nTPM: 20.2
Sample A Female 24.7
Sample B Female 20.2
Sample C Male 34.8
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 32.4
Min nTPM: 26.2
Sample A Male 26.2
Sample B Male 31.8
Sample C Female 32.4
Sample D Female 28.9
Hippocampal formation
nTPM: 31.2
Samples: 4

Max nTPM: 37.0
Min nTPM: 28.3
Sample A Male 37.0
Sample B Male 28.3
Sample C Female 30.5
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69174553 Antisense, RP_050329_03_A07, Mouse strain C57BL/6J (56 days, male) 3.8

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