HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.6 nTPM
HPA:43.6 nTPM
GTEx:24.6 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:16.2 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075391
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.6
Sample id Sample description nTPM
Hippocampus
nTPM: 41.8
2529 Female, age 94, left hemisphere 45.9
1855 Male, age 76, left hemisphere 42.6
2621 Female, age 67, right hemisphere 41.6
1911 Female, age 85, right hemisphere 41.2
1898 Male, age 80, left hemisphere 40.0
2148 Female, age 91, left hemisphere 39.6
Dentate gyrus
nTPM: 41.9
2530 Female, age 94, left hemisphere 45.6
2528 Male, age 74, both hemispheres 44.2
2010 Male, age 76, both hemispheres 42.6
2531 Female, age 67, both hemispheres 40.5
2246 Female, age 85, both hemispheres 40.0
1927 Female, age 91, both hemispheres 38.3
Entorhinal gyrus
nTPM: 42.9
2117 Female, age 91, right hemisphere 47.6
2764 Male, age 80, right hemisphere 43.7
2686 Male, age 75, right hemisphere 41.8
1787 Male, age 76, left hemisphere 41.7
1938 Female, age 85, left hemisphere 41.5
2613 Female, age 94, left hemisphere 40.8
Hippocampus, CA1
nTPM: 40.1
2082 Female, age 91, right hemisphere 42.2
2527 Male, age 74, both hemispheres 41.2
2045 Male, age 76, both hemispheres 40.3
1873 Female, age 85, both hemispheres 39.5
2749 Male, age 80, left hemisphere 37.2
Hippocampus, CA2
nTPM: 42.0
2249 Male, age 74, both hemispheres 43.5
1940 Female, age 85, left hemisphere 43.0
2437 Female, age 94, left hemisphere 43.0
2113 Female, age 91, right hemisphere 42.5
1963 Male, age 80, left hemisphere 41.6
1892 Male, age 76, both hemispheres 38.6
Hippocampus, CA3
nTPM: 40.4
2436 Male, age 74, both hemispheres 42.5
1891 Female, age 85, both hemispheres 42.1
2620 Female, age 94, left hemisphere 41.0
1867 Male, age 76, both hemispheres 40.4
2861 Female, age 67, both hemispheres 39.5
2137 Male, age 80, left hemisphere 36.9
Parahippocampal cortex
nTPM: 40.6
2532 Female, age 72, left hemisphere 43.0
1990 Female, age 91, right hemisphere 41.5
2018 Male, age 76, both hemispheres 41.4
2692 Male, age 74, both hemispheres 41.2
1933 Female, age 85, both hemispheres 41.0
2250 Female, age 67, right hemisphere 40.6
2622 Female, age 67, right hemisphere 40.4
2245 Female, age 91, both hemispheres 40.3
1850 Male, age 80, both hemispheres 38.7
2693 Female, age 94, both hemispheres 38.2
Perirhinal gyrus
nTPM: 39.1
2848 Male, age 76, right hemisphere 41.0
2521 Female, age 94, right hemisphere 39.2
1794 Male, age 80, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.4
1841 Female, age 85, right hemisphere 38.1
Subiculum
nTPM: 43.6
2042 Male, age 76, both hemispheres 47.2
1901 Male, age 80, both hemispheres 44.2
2438 Female, age 94, left hemisphere 43.4
1977 Female, age 85, both hemispheres 43.1
2619 Male, age 74, both hemispheres 42.2
2729 Female, age 91, right hemisphere 41.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 141.9
Min nTPM: 5.7
Std nTPM: 15.9
Median nTPM: 20.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 141.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 82.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 73.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 71.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 64.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 60.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 60.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 57.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 55.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 54.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.4
FF:10153-102I9 76 years, female 43.4
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.8
Sample A Female 5.6
Sample B Female 4.0
Sample C Male 5.7
Sample D Male 3.8
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 4.1
Sample A Female 4.5
Sample B Female 4.1
Sample C Male 4.5
Sample D Male 4.3
Subiculum
nTPM: 4.8
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.0
Sample A Female 5.4
Sample B Female 4.0
Sample C Male 4.3
Sample D Male 5.4
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.5
Sample A Female 3.9
Sample B Female 3.5
Sample C Male 6.8
Sample D Male 6.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 14.0
Sample C Female 15.4
Sample D Female 15.1
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.0
Sample A Male 13.0
Sample B Male 14.4
Sample C Female 18.1
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69816308 Antisense, RP_050505_04_G08, Mouse strain C57BL/6J (56 days, male) 0.9

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