HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.1 nTPM
HPA:20.1 nTPM
GTEx:19.4 nTPM
FANTOM5:39.3 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:77.7 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042935
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.1
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
1898 Male, age 80, left hemisphere 21.3
2621 Female, age 67, right hemisphere 19.5
1855 Male, age 76, left hemisphere 19.4
2148 Female, age 91, left hemisphere 19.3
1911 Female, age 85, right hemisphere 17.7
2529 Female, age 94, left hemisphere 16.0
Dentate gyrus
nTPM: 18.5
2010 Male, age 76, both hemispheres 19.8
1927 Female, age 91, both hemispheres 19.5
2531 Female, age 67, both hemispheres 19.2
2246 Female, age 85, both hemispheres 18.2
2530 Female, age 94, left hemisphere 17.5
2528 Male, age 74, both hemispheres 16.7
Entorhinal gyrus
nTPM: 17.6
2686 Male, age 75, right hemisphere 19.1
1938 Female, age 85, left hemisphere 18.2
2613 Female, age 94, left hemisphere 17.7
2764 Male, age 80, right hemisphere 17.6
1787 Male, age 76, left hemisphere 17.5
2117 Female, age 91, right hemisphere 15.5
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 23.7
1873 Female, age 85, both hemispheres 19.9
2527 Male, age 74, both hemispheres 19.8
2045 Male, age 76, both hemispheres 19.6
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 18.6
1892 Male, age 76, both hemispheres 22.2
1963 Male, age 80, left hemisphere 20.6
2249 Male, age 74, both hemispheres 18.8
2437 Female, age 94, left hemisphere 16.9
1940 Female, age 85, left hemisphere 16.4
2113 Female, age 91, right hemisphere 16.3
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 21.5
2861 Female, age 67, both hemispheres 19.7
2436 Male, age 74, both hemispheres 19.2
2620 Female, age 94, left hemisphere 19.2
1867 Male, age 76, both hemispheres 19.0
1891 Female, age 85, both hemispheres 18.3
Parahippocampal cortex
nTPM: 18.3
2245 Female, age 91, both hemispheres 20.3
1850 Male, age 80, both hemispheres 20.0
2622 Female, age 67, right hemisphere 19.1
2532 Female, age 72, left hemisphere 18.8
2693 Female, age 94, both hemispheres 18.7
2250 Female, age 67, right hemisphere 18.0
1933 Female, age 85, both hemispheres 17.9
2018 Male, age 76, both hemispheres 17.1
1990 Female, age 91, right hemisphere 16.6
2692 Male, age 74, both hemispheres 16.6
Perirhinal gyrus
nTPM: 19.3
1794 Male, age 80, right hemisphere 19.6
1847 Female, age 91, left hemisphere 19.5
1841 Female, age 85, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.9
2848 Male, age 76, right hemisphere 18.9
Subiculum
nTPM: 17.3
1901 Male, age 80, both hemispheres 19.7
2438 Female, age 94, left hemisphere 18.3
2619 Male, age 74, both hemispheres 17.2
1977 Female, age 85, both hemispheres 16.8
2042 Male, age 76, both hemispheres 16.1
2729 Female, age 91, right hemisphere 15.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 26.9
Min nTPM: 11.6
Std nTPM: 2.9
Median nTPM: 19.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 26.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 26.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 25.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 25.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 25.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 25.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.3
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 35.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 13.2
Min nTPM: 9.3
Sample A Female 9.3
Sample B Female 10.7
Sample C Male 11.1
Sample D Male 13.2
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.2
Sample A Female 11.5
Sample B Female 12.2
Sample C Male 10.2
Sample D Male 14.4
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 11.8
Sample C Male 12.2
Sample D Male 12.5
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.6
Sample A Female 11.6
Sample B Female 12.9
Sample C Male 9.6
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.2
Samples: 4

Max nTPM: 79.3
Min nTPM: 63.0
Sample A Male 70.0
Sample B Male 72.5
Sample C Female 79.3
Sample D Female 63.0
Hippocampal formation
nTPM: 77.7
Samples: 4

Max nTPM: 81.1
Min nTPM: 75.3
Sample A Male 81.1
Sample B Male 75.3
Sample C Female 78.7
Sample D Female 75.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
67870084 Antisense, RP_041018_01_C08, Mouse strain C57BL/6J (56 days, male) 9.7
176776 Antisense, RP_040604_01_E12, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

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