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TMEM176B
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  • TMEM176B
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:286.6 nTPM
HPA:277.7 nTPM
GTEx:286.6 nTPM
FANTOM5:410.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047509
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 277.7
overview
Male, age 65
Small intestine sample 232
nTPM: 177.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 370.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 284.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 277.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 286.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 286.6
Samples: 187

Max nTPM: 616.0
Min nTPM: 12.8
Std nTPM: 123.4
Median nTPM: 269.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 616.0
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 595.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 585.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 584.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 578.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 571.7
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 560.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 542.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 538.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 536.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 534.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 522.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 505.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 503.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 501.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 496.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 470.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 464.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 458.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 451.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 446.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 445.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 443.2
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 442.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 429.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 418.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 416.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 409.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 405.0
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 401.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 401.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 399.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 398.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 392.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 392.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 389.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 386.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 386.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 380.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 377.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 375.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 374.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 371.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 368.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 366.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 363.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 363.0
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 360.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 358.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 356.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 354.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 352.0
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 351.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 350.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 341.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 341.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 340.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 339.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 334.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 334.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 331.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 329.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 327.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 327.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 326.2
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 325.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 324.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 322.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 319.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 313.1
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 310.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 309.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 303.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 301.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 301.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 299.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 297.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 291.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 291.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 287.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 286.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 284.1
GTEX-14PK6-1626-SM-6871I 70-79 years, female 283.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 278.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 275.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 274.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 274.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 274.1
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 272.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 271.6
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 271.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 270.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 270.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 269.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 268.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 264.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 263.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 263.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 262.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 261.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 259.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 258.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 257.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 255.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 255.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 255.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 253.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 252.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 252.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 250.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 248.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 248.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 245.5
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 244.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 243.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 242.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 241.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 240.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 235.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 234.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 233.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 232.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 230.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 230.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 228.1
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 224.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 224.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 221.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 217.3
GTEX-1192X-2526-SM-59868 50-59 years, male 212.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 210.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 209.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 209.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 208.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 207.4
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 206.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 205.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 205.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 203.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 200.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 197.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 196.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 195.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 194.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 194.8
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 193.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 192.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 192.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 188.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 187.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 187.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 187.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 184.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 183.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 180.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 180.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 178.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 178.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 176.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 166.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 162.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 155.6
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 153.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 148.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 148.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 139.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 134.4
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 133.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 126.8
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 121.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 121.5
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 113.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 113.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 112.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 109.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 108.1
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 105.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 104.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 96.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 96.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 92.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 85.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 82.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 78.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 75.6
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 72.4
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 12.8
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 410.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 410.9
FF:10024-101D6 15,40,85 years, mixed 410.9

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