HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.5 nTPM
HPA:52.5 nTPM
GTEx:60.3 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Mouse:75.2 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008188
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.5
Sample id Sample description nTPM
Hippocampus
nTPM: 52.3
1898 Male, age 80, left hemisphere 55.6
2529 Female, age 94, left hemisphere 53.5
1911 Female, age 85, right hemisphere 52.0
1855 Male, age 76, left hemisphere 51.2
2148 Female, age 91, left hemisphere 51.0
2621 Female, age 67, right hemisphere 50.2
Dentate gyrus
nTPM: 51.6
1927 Female, age 91, both hemispheres 53.2
2010 Male, age 76, both hemispheres 52.9
2528 Male, age 74, both hemispheres 52.2
2530 Female, age 94, left hemisphere 51.0
2246 Female, age 85, both hemispheres 50.5
2531 Female, age 67, both hemispheres 49.9
Entorhinal gyrus
nTPM: 51.3
1938 Female, age 85, left hemisphere 53.3
2117 Female, age 91, right hemisphere 52.4
1787 Male, age 76, left hemisphere 51.9
2686 Male, age 75, right hemisphere 51.4
2764 Male, age 80, right hemisphere 51.1
2613 Female, age 94, left hemisphere 47.9
Hippocampus, CA1
nTPM: 52.4
2749 Male, age 80, left hemisphere 54.9
2527 Male, age 74, both hemispheres 52.4
1873 Female, age 85, both hemispheres 52.0
2045 Male, age 76, both hemispheres 51.9
2082 Female, age 91, right hemisphere 51.0
Hippocampus, CA2
nTPM: 52.5
1963 Male, age 80, left hemisphere 54.8
1892 Male, age 76, both hemispheres 54.3
2249 Male, age 74, both hemispheres 53.0
1940 Female, age 85, left hemisphere 52.1
2437 Female, age 94, left hemisphere 50.4
2113 Female, age 91, right hemisphere 50.1
Hippocampus, CA3
nTPM: 52.1
1867 Male, age 76, both hemispheres 55.0
1891 Female, age 85, both hemispheres 53.6
2137 Male, age 80, left hemisphere 53.1
2436 Male, age 74, both hemispheres 51.9
2861 Female, age 67, both hemispheres 50.7
2620 Female, age 94, left hemisphere 48.1
Parahippocampal cortex
nTPM: 51.1
2250 Female, age 67, right hemisphere 53.3
1850 Male, age 80, both hemispheres 52.8
1990 Female, age 91, right hemisphere 51.9
2018 Male, age 76, both hemispheres 51.9
1933 Female, age 85, both hemispheres 51.6
2693 Female, age 94, both hemispheres 51.3
2245 Female, age 91, both hemispheres 50.6
2692 Male, age 74, both hemispheres 50.2
2532 Female, age 72, left hemisphere 49.0
2622 Female, age 67, right hemisphere 48.2
Perirhinal gyrus
nTPM: 52.3
1847 Female, age 91, left hemisphere 53.6
1794 Male, age 80, right hemisphere 52.9
1841 Female, age 85, right hemisphere 52.3
2848 Male, age 76, right hemisphere 51.8
2521 Female, age 94, right hemisphere 51.1
Subiculum
nTPM: 51.2
1901 Male, age 80, both hemispheres 53.4
1977 Female, age 85, both hemispheres 51.9
2729 Female, age 91, right hemisphere 51.6
2042 Male, age 76, both hemispheres 51.5
2438 Female, age 94, left hemisphere 50.2
2619 Male, age 74, both hemispheres 48.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.3
Samples: 197

Max nTPM: 171.0
Min nTPM: 34.0
Std nTPM: 14.5
Median nTPM: 58.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 171.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 117.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 102.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 98.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 93.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 91.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 89.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 89.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 88.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 87.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 84.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 31.9
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.6
Samples: 4

Max nTPM: 69.9
Min nTPM: 65.9
Sample A Male 65.9
Sample B Male 66.9
Sample C Female 69.9
Sample D Female 67.5
Hippocampal formation
nTPM: 75.2
Samples: 4

Max nTPM: 89.2
Min nTPM: 66.4
Sample A Male 89.2
Sample B Male 66.4
Sample C Female 75.4
Sample D Female 69.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68797492 Antisense, RP_050125_02_D06, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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