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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:156.1 nTPM
FANTOM5:5.6 Scaled Tags Per Million
Pig:65.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB019436
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 156.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 156.1
Samples: 246

Max nTPM: 324.3
Min nTPM: 78.9
Std nTPM: 31.2
Median nTPM: 151.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 324.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 276.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 270.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 264.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 261.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 260.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 234.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 232.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 225.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 212.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 209.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 208.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 207.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 207.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 202.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 200.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 193.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 191.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 190.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 189.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 188.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 187.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 187.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 186.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 186.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 186.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 186.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 184.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 184.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 183.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 183.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 181.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 181.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 181.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 181.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 180.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 179.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 178.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 178.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 178.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 178.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 176.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 176.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 176.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 174.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 173.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 173.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 173.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 171.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 171.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 171.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 171.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 171.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 171.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 170.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 170.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 169.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 168.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 167.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 167.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 167.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 167.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 167.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 166.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 166.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 165.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 165.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 164.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 164.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 164.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 164.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 164.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 163.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 163.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 163.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 163.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 163.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 163.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 163.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 162.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 162.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 162.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 161.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 161.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 161.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 160.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 160.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 160.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 159.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 159.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 158.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 158.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 158.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 158.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 158.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 158.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 158.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 157.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 157.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 157.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 157.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 157.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 156.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 155.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 155.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 155.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 155.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 154.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 153.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 153.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 153.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 153.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 152.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 152.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 152.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 152.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 152.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 151.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 151.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 151.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 151.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 151.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 151.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 150.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 150.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 150.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 150.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 150.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 150.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 149.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 149.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 149.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 149.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 149.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 148.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 148.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 148.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 148.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 148.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 148.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 148.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 147.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 147.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 147.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 147.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 147.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 147.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 147.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 146.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 146.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 146.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 146.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 145.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 145.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 145.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 145.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 144.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 144.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 144.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 144.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 143.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 143.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 143.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 143.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 143.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 143.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 142.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 142.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 142.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 142.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 142.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 141.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 141.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 141.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 141.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 140.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 139.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 138.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 138.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 137.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 137.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 137.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 136.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 136.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 135.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 135.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 135.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 134.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 134.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 134.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 134.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 133.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 133.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 132.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 131.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 131.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 130.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 130.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 130.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 129.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 129.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 129.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 128.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 126.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 126.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 125.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 125.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 124.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 124.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 124.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 124.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 123.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 123.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 122.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 120.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 119.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 119.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 117.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 116.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 115.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 115.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 115.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 111.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 111.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 109.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 108.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 107.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 105.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 102.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 99.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 78.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 5.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 5.6
FF:10164-103B2 76 years, female 5.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 65.7
Pig sample Sample description nTPM
Caudate
nTPM: 65.7
Samples: 4

Max nTPM: 74.4
Min nTPM: 60.6
Sample A Female 60.6
Sample B Female 64.4
Sample C Male 74.4
Sample D Male 63.5

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