HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.3 nTPM
HPA:47.3 nTPM
GTEx:16.6 nTPM
FANTOM5:126.1 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:12.9 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063595Antibody HPA064970Antibody CAB009966
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.3
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
2529 Female, age 94, left hemisphere 58.4
1911 Female, age 85, right hemisphere 45.9
2148 Female, age 91, left hemisphere 39.4
1898 Male, age 80, left hemisphere 38.9
1855 Male, age 76, left hemisphere 36.4
2621 Female, age 67, right hemisphere 34.2
Dentate gyrus
nTPM: 47.3
2528 Male, age 74, both hemispheres 60.4
2530 Female, age 94, left hemisphere 59.2
2010 Male, age 76, both hemispheres 54.1
2246 Female, age 85, both hemispheres 42.6
2531 Female, age 67, both hemispheres 39.1
1927 Female, age 91, both hemispheres 28.5
Entorhinal gyrus
nTPM: 29.1
2117 Female, age 91, right hemisphere 46.9
1787 Male, age 76, left hemisphere 32.1
2686 Male, age 75, right hemisphere 28.6
1938 Female, age 85, left hemisphere 25.7
2764 Male, age 80, right hemisphere 23.0
2613 Female, age 94, left hemisphere 18.3
Hippocampus, CA1
nTPM: 36.4
2082 Female, age 91, right hemisphere 46.2
1873 Female, age 85, both hemispheres 45.3
2527 Male, age 74, both hemispheres 37.4
2045 Male, age 76, both hemispheres 35.0
2749 Male, age 80, left hemisphere 17.9
Hippocampus, CA2
nTPM: 37.1
2249 Male, age 74, both hemispheres 51.5
1940 Female, age 85, left hemisphere 45.4
2113 Female, age 91, right hemisphere 39.6
2437 Female, age 94, left hemisphere 37.5
1963 Male, age 80, left hemisphere 24.8
1892 Male, age 76, both hemispheres 23.7
Hippocampus, CA3
nTPM: 35.8
2620 Female, age 94, left hemisphere 59.8
2861 Female, age 67, both hemispheres 38.3
1891 Female, age 85, both hemispheres 34.1
2436 Male, age 74, both hemispheres 32.5
1867 Male, age 76, both hemispheres 27.8
2137 Male, age 80, left hemisphere 22.6
Parahippocampal cortex
nTPM: 27.4
2250 Female, age 67, right hemisphere 35.0
2018 Male, age 76, both hemispheres 34.6
2245 Female, age 91, both hemispheres 30.0
2692 Male, age 74, both hemispheres 28.9
2622 Female, age 67, right hemisphere 27.0
1990 Female, age 91, right hemisphere 25.9
1933 Female, age 85, both hemispheres 24.7
1850 Male, age 80, both hemispheres 23.2
2532 Female, age 72, left hemisphere 22.6
2693 Female, age 94, both hemispheres 21.8
Perirhinal gyrus
nTPM: 24.0
2848 Male, age 76, right hemisphere 26.0
2521 Female, age 94, right hemisphere 24.8
1794 Male, age 80, right hemisphere 24.2
1841 Female, age 85, right hemisphere 23.2
1847 Female, age 91, left hemisphere 21.7
Subiculum
nTPM: 33.6
2729 Female, age 91, right hemisphere 48.6
2619 Male, age 74, both hemispheres 42.1
2042 Male, age 76, both hemispheres 40.0
1977 Female, age 85, both hemispheres 28.3
1901 Male, age 80, both hemispheres 23.8
2438 Female, age 94, left hemisphere 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 142.3
Min nTPM: 2.4
Std nTPM: 15.4
Median nTPM: 11.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 142.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 95.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 58.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 54.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 53.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 50.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 49.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 45.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 45.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 40.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.1
FF:10153-102I9 76 years, female 137.1
FF:10169-103B7 60 years, female 115.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.3
Sample A Female 5.4
Sample B Female 6.0
Sample C Male 7.0
Sample D Male 5.3
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 25.5
Min nTPM: 2.8
Sample A Female 25.5
Sample B Female 8.0
Sample C Male 8.9
Sample D Male 2.8
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 23.6
Min nTPM: 2.1
Sample A Female 13.0
Sample B Female 2.1
Sample C Male 11.9
Sample D Male 23.6
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 4.5
Sample A Female 12.9
Sample B Female 4.5
Sample C Male 24.9
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 15.6
Min nTPM: 11.4
Sample A Male 12.1
Sample B Male 11.4
Sample C Female 12.3
Sample D Female 15.6
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 5.2
Sample A Male 5.2
Sample B Male 7.0
Sample C Female 7.9
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69524398 Antisense, RP_050419_04_C06, Mouse strain C57BL/6J (56 days, male) 0.9

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