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EIF4H
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:183.0 nTPM
FANTOM5:104.6 Scaled Tags Per Million
Pig:156.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030542
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 183.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 183.0
Samples: 246

Max nTPM: 285.1
Min nTPM: 135.1
Std nTPM: 24.0
Median nTPM: 180.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 285.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 261.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 249.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 244.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 238.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 235.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 235.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 235.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 235.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 231.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 228.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 228.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 225.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 224.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 222.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 222.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 219.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 219.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 217.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 216.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 215.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 215.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 215.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 214.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 214.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 212.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 212.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 211.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 211.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 210.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 210.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 209.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 209.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 209.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 208.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 207.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 207.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 207.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 206.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 206.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 206.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 206.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 204.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 204.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 203.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 203.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 203.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 203.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 203.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 202.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 202.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 202.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 201.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 201.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 199.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 199.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 199.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 199.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 197.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 197.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 197.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 197.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 197.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 196.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 196.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 196.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 196.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 195.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 195.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 195.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 195.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 194.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 194.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 193.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 193.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 193.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 192.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 192.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 191.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 191.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 191.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 191.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 190.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 190.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 190.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 190.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 190.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 190.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 189.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 189.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 188.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 188.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 188.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 187.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 187.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 187.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 186.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 186.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 186.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 186.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 185.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 185.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 185.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 185.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 185.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 185.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 185.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 184.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 184.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 184.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 183.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 183.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 183.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 183.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 182.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 182.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 182.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 182.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 181.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 181.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 181.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 181.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 180.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 180.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 180.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 179.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 179.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 178.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 178.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 178.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 178.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 178.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 178.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 178.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 178.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 177.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 177.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 177.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 177.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 177.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 176.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 176.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 176.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 176.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 176.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 175.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 175.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 175.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 174.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 173.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 173.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 173.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 173.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 173.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 172.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 172.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 172.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 171.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 171.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 170.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 170.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 170.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 170.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 170.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 169.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 169.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 169.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 167.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 167.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 166.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 166.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 166.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 166.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 166.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 166.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 166.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 166.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 166.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 165.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 165.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 165.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 165.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 165.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 165.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 164.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 164.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 164.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 163.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 163.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 163.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 162.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 162.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 161.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 161.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 161.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 161.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 161.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 160.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 160.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 159.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 159.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 159.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 159.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 159.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 159.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 159.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 158.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 158.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 158.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 158.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 157.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 157.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 157.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 156.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 155.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 155.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 155.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 151.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 150.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 150.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 150.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 149.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 149.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 149.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 148.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 145.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 141.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 141.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 140.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 139.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 137.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 136.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 136.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 135.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 104.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.6
FF:10164-103B2 76 years, female 104.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 156.5
Pig sample Sample description nTPM
Caudate
nTPM: 156.5
Samples: 4

Max nTPM: 184.6
Min nTPM: 136.8
Sample A Female 146.9
Sample B Female 157.8
Sample C Male 184.6
Sample D Male 136.8

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