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DNM1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:84.9 nTPM
FANTOM5:182.5 Scaled Tags Per Million
Pig:139.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049910Antibody CAB005920
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 84.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.9
Samples: 246

Max nTPM: 432.8
Min nTPM: 9.3
Std nTPM: 49.2
Median nTPM: 85.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 432.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 182.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 172.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 168.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 167.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 164.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 163.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 162.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 161.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 158.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 158.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 156.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 154.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 154.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 153.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 152.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 152.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 151.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 151.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 149.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 148.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 146.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 146.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 144.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 144.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 142.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 142.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 142.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 141.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 141.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 140.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 139.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 137.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 137.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 136.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 132.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 132.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 131.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 128.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 127.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 127.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 124.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 123.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 122.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 121.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 121.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 119.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 119.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 119.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 118.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 117.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 115.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 113.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 113.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 112.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 112.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 111.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 111.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 111.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 110.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 110.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 109.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 108.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 108.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 106.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 106.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 105.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 103.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 103.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 102.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 102.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 98.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 98.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 98.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 97.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 97.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 97.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 97.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 96.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 96.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 95.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 95.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 95.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 94.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 93.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 93.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 90.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 90.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 90.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 89.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 88.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 87.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 87.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 86.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 85.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 84.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 84.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 83.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 83.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 83.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 82.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 78.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 78.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 77.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 77.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 76.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 75.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 75.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 73.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 72.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 71.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 70.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 70.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 69.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 68.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 68.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 68.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 68.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 66.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 65.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 64.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 63.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 61.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 58.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 57.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 56.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 55.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 54.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 52.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 50.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 48.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 47.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 47.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 45.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 45.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 43.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 42.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 42.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 40.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 39.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 38.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 37.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 35.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 34.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 33.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 33.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 32.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 32.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 32.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 32.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 32.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 31.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 30.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 29.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 27.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 26.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 25.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 22.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 20.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 19.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 17.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 17.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 15.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 15.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 14.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 182.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 182.5
FF:10164-103B2 76 years, female 182.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.1
Pig sample Sample description nTPM
Caudate
nTPM: 139.1
Samples: 4

Max nTPM: 162.9
Min nTPM: 113.1
Sample A Female 113.1
Sample B Female 143.9
Sample C Male 162.9
Sample D Male 136.5

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