HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.9 nTPM
HPA:30.9 nTPM
GTEx:27.9 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:26.1 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045865
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1898 Male, age 80, left hemisphere 28.6
2148 Female, age 91, left hemisphere 28.1
2529 Female, age 94, left hemisphere 28.1
2621 Female, age 67, right hemisphere 28.0
1855 Male, age 76, left hemisphere 27.6
1911 Female, age 85, right hemisphere 27.1
Dentate gyrus
nTPM: 28.3
2531 Female, age 67, both hemispheres 30.0
2530 Female, age 94, left hemisphere 29.1
2528 Male, age 74, both hemispheres 28.7
2246 Female, age 85, both hemispheres 27.7
2010 Male, age 76, both hemispheres 27.3
1927 Female, age 91, both hemispheres 26.8
Entorhinal gyrus
nTPM: 30.9
2613 Female, age 94, left hemisphere 34.6
2764 Male, age 80, right hemisphere 33.9
2686 Male, age 75, right hemisphere 31.6
1938 Female, age 85, left hemisphere 29.1
1787 Male, age 76, left hemisphere 29.0
2117 Female, age 91, right hemisphere 27.3
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 28.6
2082 Female, age 91, right hemisphere 27.7
2527 Male, age 74, both hemispheres 27.3
1873 Female, age 85, both hemispheres 27.2
2045 Male, age 76, both hemispheres 24.6
Hippocampus, CA2
nTPM: 28.1
1963 Male, age 80, left hemisphere 31.2
2437 Female, age 94, left hemisphere 29.3
2113 Female, age 91, right hemisphere 28.0
1940 Female, age 85, left hemisphere 27.8
1892 Male, age 76, both hemispheres 26.8
2249 Male, age 74, both hemispheres 25.3
Hippocampus, CA3
nTPM: 28.2
2861 Female, age 67, both hemispheres 33.1
2620 Female, age 94, left hemisphere 30.2
2137 Male, age 80, left hemisphere 27.8
1891 Female, age 85, both hemispheres 27.1
1867 Male, age 76, both hemispheres 26.7
2436 Male, age 74, both hemispheres 24.5
Parahippocampal cortex
nTPM: 29.0
2622 Female, age 67, right hemisphere 31.1
1933 Female, age 85, both hemispheres 30.3
1850 Male, age 80, both hemispheres 29.7
2532 Female, age 72, left hemisphere 29.5
2692 Male, age 74, both hemispheres 29.5
2693 Female, age 94, both hemispheres 29.0
2245 Female, age 91, both hemispheres 28.2
1990 Female, age 91, right hemisphere 27.5
2018 Male, age 76, both hemispheres 27.4
2250 Female, age 67, right hemisphere 27.4
Perirhinal gyrus
nTPM: 29.4
1794 Male, age 80, right hemisphere 30.9
2521 Female, age 94, right hemisphere 30.5
1847 Female, age 91, left hemisphere 28.9
2848 Male, age 76, right hemisphere 28.4
1841 Female, age 85, right hemisphere 28.3
Subiculum
nTPM: 27.3
1977 Female, age 85, both hemispheres 28.7
2042 Male, age 76, both hemispheres 28.0
2619 Male, age 74, both hemispheres 28.0
2729 Female, age 91, right hemisphere 27.6
1901 Male, age 80, both hemispheres 26.4
2438 Female, age 94, left hemisphere 24.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 46.4
Min nTPM: 12.8
Std nTPM: 6.1
Median nTPM: 27.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 46.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 44.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 41.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 39.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 38.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 38.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.1
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.4
Sample A Female 12.4
Sample B Female 10.0
Sample C Male 10.0
Sample D Male 7.4
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.6
Sample A Female 10.6
Sample B Female 8.6
Sample C Male 10.8
Sample D Male 8.6
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.9
Sample A Female 12.0
Sample B Female 9.4
Sample C Male 9.7
Sample D Male 8.9
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 13.7
Min nTPM: 7.9
Sample A Female 10.4
Sample B Female 7.9
Sample C Male 13.7
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 21.3
Sample A Male 23.2
Sample B Male 21.3
Sample C Female 24.5
Sample D Female 25.4
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.2
Sample A Male 23.2
Sample B Male 26.2
Sample C Female 30.4
Sample D Female 24.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68498980 Antisense, RP_050113_02_G03, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

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