HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:39.8 nTPM
HPA:39.8 nTPM
GTEx:33.3 nTPM
FANTOM5:20.0 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:46.2 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1898 Male, age 80, left hemisphere 40.5
2621 Female, age 67, right hemisphere 39.9
2529 Female, age 94, left hemisphere 39.8
2148 Female, age 91, left hemisphere 38.2
1855 Male, age 76, left hemisphere 37.9
1911 Female, age 85, right hemisphere 36.1
Dentate gyrus
nTPM: 38.0
2531 Female, age 67, both hemispheres 39.6
2530 Female, age 94, left hemisphere 39.3
2010 Male, age 76, both hemispheres 38.2
2246 Female, age 85, both hemispheres 37.4
1927 Female, age 91, both hemispheres 37.0
2528 Male, age 74, both hemispheres 36.4
Entorhinal gyrus
nTPM: 39.6
2764 Male, age 80, right hemisphere 40.8
2613 Female, age 94, left hemisphere 40.1
2686 Male, age 75, right hemisphere 40.0
2117 Female, age 91, right hemisphere 39.7
1938 Female, age 85, left hemisphere 38.8
1787 Male, age 76, left hemisphere 38.2
Hippocampus, CA1
nTPM: 38.1
2045 Male, age 76, both hemispheres 40.0
2749 Male, age 80, left hemisphere 39.6
2527 Male, age 74, both hemispheres 37.8
1873 Female, age 85, both hemispheres 37.0
2082 Female, age 91, right hemisphere 36.3
Hippocampus, CA2
nTPM: 37.8
1963 Male, age 80, left hemisphere 38.9
1892 Male, age 76, both hemispheres 38.8
2113 Female, age 91, right hemisphere 38.0
2437 Female, age 94, left hemisphere 37.8
1940 Female, age 85, left hemisphere 37.1
2249 Male, age 74, both hemispheres 36.5
Hippocampus, CA3
nTPM: 38.5
2861 Female, age 67, both hemispheres 40.3
2620 Female, age 94, left hemisphere 39.3
2137 Male, age 80, left hemisphere 38.7
1867 Male, age 76, both hemispheres 38.4
1891 Female, age 85, both hemispheres 38.3
2436 Male, age 74, both hemispheres 36.1
Parahippocampal cortex
nTPM: 38.4
1850 Male, age 80, both hemispheres 40.8
2622 Female, age 67, right hemisphere 39.5
1933 Female, age 85, both hemispheres 39.0
2692 Male, age 74, both hemispheres 38.7
2245 Female, age 91, both hemispheres 38.4
2693 Female, age 94, both hemispheres 38.2
1990 Female, age 91, right hemisphere 37.8
2018 Male, age 76, both hemispheres 37.7
2532 Female, age 72, left hemisphere 37.7
2250 Female, age 67, right hemisphere 36.4
Perirhinal gyrus
nTPM: 39.8
1847 Female, age 91, left hemisphere 41.0
1794 Male, age 80, right hemisphere 40.4
2521 Female, age 94, right hemisphere 39.6
1841 Female, age 85, right hemisphere 39.4
2848 Male, age 76, right hemisphere 38.4
Subiculum
nTPM: 38.2
2619 Male, age 74, both hemispheres 39.4
2438 Female, age 94, left hemisphere 39.0
2042 Male, age 76, both hemispheres 38.3
1977 Female, age 85, both hemispheres 38.0
1901 Male, age 80, both hemispheres 37.4
2729 Female, age 91, right hemisphere 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 59.2
Min nTPM: 20.3
Std nTPM: 6.8
Median nTPM: 32.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 59.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 50.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 49.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 47.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 46.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10153-102I9 76 years, female 24.4
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 34.2
Min nTPM: 19.3
Sample A Female 34.2
Sample B Female 27.0
Sample C Male 26.8
Sample D Male 19.3
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 23.0
Sample A Female 30.6
Sample B Female 29.9
Sample C Male 28.7
Sample D Male 23.0
Subiculum
nTPM: 26.2
Samples: 4

Max nTPM: 35.2
Min nTPM: 21.5
Sample A Female 35.2
Sample B Female 24.4
Sample C Male 23.8
Sample D Male 21.5
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 19.0
Sample A Female 26.6
Sample B Female 19.0
Sample C Male 31.0
Sample D Male 25.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 50.0
Min nTPM: 41.0
Sample A Male 41.0
Sample B Male 46.2
Sample C Female 47.7
Sample D Female 50.0
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 39.1
Sample A Male 47.1
Sample B Male 39.1
Sample C Female 45.6
Sample D Female 44.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
69080032 Antisense, RP_050324_01_E10, Mouse strain C57BL/6J (56 days, male) 4.8

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