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NPDC1
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  • NPDC1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:147.8 nTPM
FANTOM5:203.4 Scaled Tags Per Million
Pig:66.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA008189
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 147.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 147.8
Samples: 246

Max nTPM: 266.3
Min nTPM: 61.6
Std nTPM: 32.9
Median nTPM: 144.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 266.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 264.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 243.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 229.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 225.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 223.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 223.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 220.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 217.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 214.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 213.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 207.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 207.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 203.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 202.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 199.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 199.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 195.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 195.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 195.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 193.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 193.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 191.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 189.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 189.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 188.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 188.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 188.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 188.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 188.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 187.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 184.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 182.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 179.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 178.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 178.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 178.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 177.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 177.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 177.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 176.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 176.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 175.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 175.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 174.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 173.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 173.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 172.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 170.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 169.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 169.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 168.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 168.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 167.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 167.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 166.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 165.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 165.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 165.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 165.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 164.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 164.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 163.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 163.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 163.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 163.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 162.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 161.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 161.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 161.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 161.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 161.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 161.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 159.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 159.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 159.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 159.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 158.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 158.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 158.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 158.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 158.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 157.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 157.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 156.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 156.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 156.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 156.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 156.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 155.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 155.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 155.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 154.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 153.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 153.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 153.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 151.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 151.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 149.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 149.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 149.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 149.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 148.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 148.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 148.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 148.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 148.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 147.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 147.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 147.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 147.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 146.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 146.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 146.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 145.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 145.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 145.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 144.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 143.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 143.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 143.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 142.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 142.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 142.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 141.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 141.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 141.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 141.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 141.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 141.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 140.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 140.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 140.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 140.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 139.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 139.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 139.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 139.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 139.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 138.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 138.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 137.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 137.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 136.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 136.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 135.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 135.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 135.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 134.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 133.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 133.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 133.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 133.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 132.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 132.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 132.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 131.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 131.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 130.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 130.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 129.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 129.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 129.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 129.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 127.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 127.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 127.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 126.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 126.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 126.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 126.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 126.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 126.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 125.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 125.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 125.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 125.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 124.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 124.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 124.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 124.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 123.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 123.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 123.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 121.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 121.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 121.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 121.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 120.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 119.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 119.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 118.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 118.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 118.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 117.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 117.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 116.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 115.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 114.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 113.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 113.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 112.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 111.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 111.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 109.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 109.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 109.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 108.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 107.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 107.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 101.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 98.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 96.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 94.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 91.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 89.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 88.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 87.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 86.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 75.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 203.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 203.4
FF:10164-103B2 76 years, female 203.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 66.6
Pig sample Sample description nTPM
Caudate
nTPM: 66.6
Samples: 4

Max nTPM: 78.2
Min nTPM: 55.4
Sample A Female 57.3
Sample B Female 75.4
Sample C Male 78.2
Sample D Male 55.4

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