AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		127.220
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:63.0 nTPM
HPA:63.0 nTPM
GTEx:54.9 nTPM
FANTOM5:89.1 Scaled Tags Per Million
Pig:69.0 nTPM
Mouse:195.0 nTPM
Allen mouse:18.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA026685
Amygdala mean intensity 127.220
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 108.024
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 92.296
Cortical amygdala 127.220
Central amygdala 95.470
Medial amygdaloid nucleus 123.244

AMYGDALA - HPA Brain RNA-seq
Max nTPM 63.0
Sample id Sample description nTPM
Amygdala
nTPM: 23.1
2814 Male, age 76, right hemisphere 32.2
1987 Female, age 91, left hemisphere 29.8
2517 Female, age 94, left hemisphere 22.1
2695 Female, age 67, right hemisphere 15.8
2514 Male, age 75, right hemisphere 15.6
Basal amygdala
nTPM: 32.9
2243 Female, age 91, right hemisphere 59.3
2110 Male, age 80, left hemisphere 39.7
2685 Female, age 94, left hemisphere 35.5
1955 Male, age 76, both hemispheres 31.7
2609 Male, age 75, right hemisphere 18.4
2827 Female, age 67, right hemisphere 12.9
Central amygdala
nTPM: 26.7
2239 Male, age 80, left hemisphere 38.1
1905 Male, age 76, both hemispheres 32.5
2515 Male, age 75, right hemisphere 25.2
2826 Female, age 94, left hemisphere 19.1
2701 Female, age 91, right hemisphere 18.5
Corticomedial amygdala
nTPM: 35.0
2829 Male, age 80, left hemisphere 56.3
2242 Female, age 91, right hemisphere 41.2
2429 Female, age 94, left hemisphere 36.8
2240 Male, age 76, both hemispheres 29.8
2428 Male, age 75, right hemisphere 24.0
2535 Female, age 67, right hemisphere 22.1
Lateral amygdala
nTPM: 23.6
2534 Female, age 94, left hemisphere 42.9
1883 Male, age 76, both hemispheres 42.8
2256 Male, age 80, left hemisphere 23.9
2255 Female, age 91, right hemisphere 15.2
2516 Male, age 75, right hemisphere 11.0
2830 Female, age 67, right hemisphere 6.0
Stria terminalis, bed nucleus
nTPM: 63.0
1974 Female, age 91, both hemispheres 93.0
2486 Female, age 94, both hemispheres 79.5
2201 Male, age 74, unknown 16.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 54.9
Samples: 152

Max nTPM: 188.4
Min nTPM: 4.4
Std nTPM: 35.9
Median nTPM: 48.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 188.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 176.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 149.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 138.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 133.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 128.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 128.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 128.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 126.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 117.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 117.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 89.1
FF:10151-102I7 76 years, female 89.1

AMYGDALA - Pig RNA-seqi
Average nTPM 69.0
Pig sample Sample description nTPM
Amygdala
nTPM: 69.1
Samples: 4

Max nTPM: 112.8
Min nTPM: 42.7
Sample A Female 112.8
Sample B Female 42.7
Sample C Male 67.7
Sample D Male 53.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 195.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 195.0
Samples: 4

Max nTPM: 205.2
Min nTPM: 183.5
Sample A Male 202.7
Sample B Male 205.2
Sample C Female 183.5
Sample D Female 188.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 18.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 18.8
74581397 Antisense, RP_060117_02_C06, Mouse strain C57BL/6J (56 days, male) 19.8
68196982 Antisense, RP_040928_01_B03, Mouse strain C57BL/6J (56 days, male) 17.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.