HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.8 nTPM
HPA:14.8 nTPM
GTEx:25.5 nTPM
FANTOM5:45.7 Scaled Tags Per Million
Pig:20.9 nTPM
Mouse:45.3 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047862
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
1911 Female, age 85, right hemisphere 14.5
1898 Male, age 80, left hemisphere 13.1
2621 Female, age 67, right hemisphere 12.3
2529 Female, age 94, left hemisphere 11.6
2148 Female, age 91, left hemisphere 10.6
1855 Male, age 76, left hemisphere 10.5
Dentate gyrus
nTPM: 12.6
2530 Female, age 94, left hemisphere 17.9
2528 Male, age 74, both hemispheres 13.9
2010 Male, age 76, both hemispheres 13.8
2246 Female, age 85, both hemispheres 10.7
1927 Female, age 91, both hemispheres 10.2
2531 Female, age 67, both hemispheres 9.2
Entorhinal gyrus
nTPM: 13.6
2117 Female, age 91, right hemisphere 20.0
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 13.3
2613 Female, age 94, left hemisphere 11.8
1787 Male, age 76, left hemisphere 11.2
2686 Male, age 75, right hemisphere 10.0
Hippocampus, CA1
nTPM: 13.1
2749 Male, age 80, left hemisphere 17.1
2527 Male, age 74, both hemispheres 13.3
1873 Female, age 85, both hemispheres 12.6
2082 Female, age 91, right hemisphere 12.2
2045 Male, age 76, both hemispheres 10.1
Hippocampus, CA2
nTPM: 13.9
1963 Male, age 80, left hemisphere 17.6
2249 Male, age 74, both hemispheres 15.2
1892 Male, age 76, both hemispheres 13.7
1940 Female, age 85, left hemisphere 12.7
2113 Female, age 91, right hemisphere 12.4
2437 Female, age 94, left hemisphere 11.8
Hippocampus, CA3
nTPM: 11.8
1891 Female, age 85, both hemispheres 17.0
1867 Male, age 76, both hemispheres 15.5
2137 Male, age 80, left hemisphere 13.2
2436 Male, age 74, both hemispheres 10.1
2620 Female, age 94, left hemisphere 7.8
2861 Female, age 67, both hemispheres 7.3
Parahippocampal cortex
nTPM: 11.0
1990 Female, age 91, right hemisphere 13.9
2692 Male, age 74, both hemispheres 13.0
1850 Male, age 80, both hemispheres 12.7
1933 Female, age 85, both hemispheres 12.0
2018 Male, age 76, both hemispheres 11.6
2532 Female, age 72, left hemisphere 11.3
2245 Female, age 91, both hemispheres 10.6
2693 Female, age 94, both hemispheres 10.2
2250 Female, age 67, right hemisphere 8.8
2622 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 10.1
2848 Male, age 76, right hemisphere 10.6
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 10.0
1841 Female, age 85, right hemisphere 9.8
2521 Female, age 94, right hemisphere 9.6
Subiculum
nTPM: 14.8
1901 Male, age 80, both hemispheres 18.6
2042 Male, age 76, both hemispheres 18.6
1977 Female, age 85, both hemispheres 16.9
2438 Female, age 94, left hemisphere 12.3
2619 Male, age 74, both hemispheres 11.6
2729 Female, age 91, right hemisphere 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.5
Samples: 197

Max nTPM: 105.5
Min nTPM: 8.8
Std nTPM: 13.7
Median nTPM: 21.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 105.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 72.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 66.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 61.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 60.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 56.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 53.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 52.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 50.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.7
FF:10153-102I9 76 years, female 58.9
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 28.3
Min nTPM: 13.0
Sample A Female 28.3
Sample B Female 18.5
Sample C Male 23.6
Sample D Male 13.0
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.9
Sample A Female 12.0
Sample B Female 15.5
Sample C Male 13.0
Sample D Male 11.9
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.8
Sample A Female 17.3
Sample B Female 16.4
Sample C Male 12.8
Sample D Male 14.8
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.3
Sample A Female 19.0
Sample B Female 13.3
Sample C Male 14.8
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.7
Samples: 4

Max nTPM: 38.5
Min nTPM: 33.7
Sample A Male 38.5
Sample B Male 36.6
Sample C Female 37.8
Sample D Female 33.7
Hippocampal formation
nTPM: 45.3
Samples: 4

Max nTPM: 51.5
Min nTPM: 40.6
Sample A Male 45.3
Sample B Male 40.6
Sample C Female 51.5
Sample D Female 43.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.