HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.9 nTPM
HPA:53.9 nTPM
GTEx:34.6 nTPM
FANTOM5:95.3 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:2.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038834
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.9
Sample id Sample description nTPM
Hippocampus
nTPM: 51.7
2529 Female, age 94, left hemisphere 53.7
1911 Female, age 85, right hemisphere 53.6
1855 Male, age 76, left hemisphere 53.0
2148 Female, age 91, left hemisphere 52.4
1898 Male, age 80, left hemisphere 50.6
2621 Female, age 67, right hemisphere 47.0
Dentate gyrus
nTPM: 49.5
2528 Male, age 74, both hemispheres 56.4
2530 Female, age 94, left hemisphere 50.0
2246 Female, age 85, both hemispheres 49.8
2010 Male, age 76, both hemispheres 47.1
1927 Female, age 91, both hemispheres 46.9
2531 Female, age 67, both hemispheres 46.8
Entorhinal gyrus
nTPM: 50.4
2117 Female, age 91, right hemisphere 53.5
2686 Male, age 75, right hemisphere 50.9
2613 Female, age 94, left hemisphere 50.3
1938 Female, age 85, left hemisphere 50.2
2764 Male, age 80, right hemisphere 49.0
1787 Male, age 76, left hemisphere 48.5
Hippocampus, CA1
nTPM: 49.2
1873 Female, age 85, both hemispheres 54.0
2082 Female, age 91, right hemisphere 53.8
2527 Male, age 74, both hemispheres 50.8
2045 Male, age 76, both hemispheres 46.1
2749 Male, age 80, left hemisphere 41.5
Hippocampus, CA2
nTPM: 51.1
2437 Female, age 94, left hemisphere 53.6
2249 Male, age 74, both hemispheres 52.7
2113 Female, age 91, right hemisphere 52.3
1940 Female, age 85, left hemisphere 51.4
1963 Male, age 80, left hemisphere 50.1
1892 Male, age 76, both hemispheres 46.5
Hippocampus, CA3
nTPM: 47.4
1891 Female, age 85, both hemispheres 53.4
2436 Male, age 74, both hemispheres 49.5
1867 Male, age 76, both hemispheres 47.4
2861 Female, age 67, both hemispheres 45.6
2620 Female, age 94, left hemisphere 45.0
2137 Male, age 80, left hemisphere 43.7
Parahippocampal cortex
nTPM: 48.9
2692 Male, age 74, both hemispheres 56.0
2018 Male, age 76, both hemispheres 50.6
1990 Female, age 91, right hemisphere 50.0
2693 Female, age 94, both hemispheres 49.7
2622 Female, age 67, right hemisphere 49.0
2250 Female, age 67, right hemisphere 48.6
1933 Female, age 85, both hemispheres 47.2
2245 Female, age 91, both hemispheres 46.2
1850 Male, age 80, both hemispheres 45.8
2532 Female, age 72, left hemisphere 45.5
Perirhinal gyrus
nTPM: 46.3
2521 Female, age 94, right hemisphere 49.3
1847 Female, age 91, left hemisphere 47.0
1794 Male, age 80, right hemisphere 46.3
2848 Male, age 76, right hemisphere 45.6
1841 Female, age 85, right hemisphere 43.3
Subiculum
nTPM: 53.9
2619 Male, age 74, both hemispheres 58.0
2729 Female, age 91, right hemisphere 57.6
2042 Male, age 76, both hemispheres 55.5
2438 Female, age 94, left hemisphere 53.7
1901 Male, age 80, both hemispheres 51.5
1977 Female, age 85, both hemispheres 47.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 98.8
Min nTPM: 9.7
Std nTPM: 15.8
Median nTPM: 30.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 98.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 85.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 74.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 70.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 70.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 67.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 67.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 66.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 66.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 63.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 62.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.3
FF:10153-102I9 76 years, female 122.7
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 31.8
Min nTPM: 14.3
Sample A Female 31.8
Sample B Female 19.4
Sample C Male 28.3
Sample D Male 14.3
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.8
Sample A Female 13.8
Sample B Female 13.2
Sample C Male 10.8
Sample D Male 11.2
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.3
Sample A Female 14.7
Sample B Female 13.6
Sample C Male 10.3
Sample D Male 14.3
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 22.1
Min nTPM: 11.8
Sample A Female 21.4
Sample B Female 11.8
Sample C Male 16.8
Sample D Male 22.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.5
Sample A Male 2.6
Sample B Male 2.2
Sample C Female 1.6
Sample D Female 1.5
Hippocampal formation
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.7
Sample A Male 1.8
Sample B Male 1.7
Sample C Female 2.0
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74988636 Antisense, RP_060315_05_F11, Mouse strain C57BL/6J (56 days, male) 0.1
70565159 Antisense, RP_050623_04_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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