HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:14.3 nTPM
FANTOM5:22.0 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:10.5 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076687
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.1
2148 Female, age 91, left hemisphere 13.9
1898 Male, age 80, left hemisphere 13.5
2621 Female, age 67, right hemisphere 13.3
1855 Male, age 76, left hemisphere 13.1
1911 Female, age 85, right hemisphere 12.8
2529 Female, age 94, left hemisphere 12.0
Dentate gyrus
nTPM: 15.1
2530 Female, age 94, left hemisphere 23.2
2010 Male, age 76, both hemispheres 16.1
2528 Male, age 74, both hemispheres 15.1
2531 Female, age 67, both hemispheres 15.1
2246 Female, age 85, both hemispheres 12.8
1927 Female, age 91, both hemispheres 8.4
Entorhinal gyrus
nTPM: 12.2
2117 Female, age 91, right hemisphere 21.5
2764 Male, age 80, right hemisphere 13.1
2686 Male, age 75, right hemisphere 11.4
1787 Male, age 76, left hemisphere 9.4
2613 Female, age 94, left hemisphere 8.9
1938 Female, age 85, left hemisphere 8.8
Hippocampus, CA1
nTPM: 10.6
2045 Male, age 76, both hemispheres 12.0
1873 Female, age 85, both hemispheres 11.5
2527 Male, age 74, both hemispheres 11.1
2082 Female, age 91, right hemisphere 10.5
2749 Male, age 80, left hemisphere 7.7
Hippocampus, CA2
nTPM: 12.6
1940 Female, age 85, left hemisphere 16.0
2437 Female, age 94, left hemisphere 14.0
1963 Male, age 80, left hemisphere 13.9
2249 Male, age 74, both hemispheres 13.5
2113 Female, age 91, right hemisphere 10.7
1892 Male, age 76, both hemispheres 7.8
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 15.0
2436 Male, age 74, both hemispheres 14.3
1891 Female, age 85, both hemispheres 14.2
2861 Female, age 67, both hemispheres 13.8
1867 Male, age 76, both hemispheres 9.9
2137 Male, age 80, left hemisphere 7.8
Parahippocampal cortex
nTPM: 9.8
2692 Male, age 74, both hemispheres 13.0
2532 Female, age 72, left hemisphere 12.8
2018 Male, age 76, both hemispheres 11.9
1990 Female, age 91, right hemisphere 10.7
2245 Female, age 91, both hemispheres 9.0
1850 Male, age 80, both hemispheres 8.9
1933 Female, age 85, both hemispheres 8.8
2622 Female, age 67, right hemisphere 8.6
2250 Female, age 67, right hemisphere 7.6
2693 Female, age 94, both hemispheres 7.1
Perirhinal gyrus
nTPM: 7.8
2521 Female, age 94, right hemisphere 10.7
1794 Male, age 80, right hemisphere 8.6
1841 Female, age 85, right hemisphere 7.5
2848 Male, age 76, right hemisphere 7.1
1847 Female, age 91, left hemisphere 5.3
Subiculum
nTPM: 14.6
2042 Male, age 76, both hemispheres 21.2
2729 Female, age 91, right hemisphere 15.7
1901 Male, age 80, both hemispheres 15.4
1977 Female, age 85, both hemispheres 12.3
2619 Male, age 74, both hemispheres 12.3
2438 Female, age 94, left hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 39.9
Min nTPM: 4.2
Std nTPM: 6.3
Median nTPM: 13.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 32.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 31.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 27.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 27.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 27.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 27.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 26.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.0
FF:10153-102I9 76 years, female 26.3
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 7.0
Sample A Female 20.9
Sample B Female 11.5
Sample C Male 16.9
Sample D Male 7.0
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.9
Sample A Female 9.5
Sample B Female 8.6
Sample C Male 6.9
Sample D Male 8.8
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.3
Sample A Female 12.3
Sample B Female 8.9
Sample C Male 8.6
Sample D Male 7.3
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.6
Min nTPM: 8.5
Sample A Female 13.5
Sample B Female 8.5
Sample C Male 15.6
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 8.6
Min nTPM: 2.8
Sample A Male 8.6
Sample B Male 3.8
Sample C Female 4.0
Sample D Female 2.8
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 16.1
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 9.0
Sample C Female 16.1
Sample D Female 11.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71656860 Antisense, RP_050927_04_D10, Mouse strain C57BL/6J (56 days, male) 0.9
74274687 Antisense, RP_050927_04_D10, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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