HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.9 nTPM
HPA:29.9 nTPM
GTEx:13.9 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Pig:44.1 nTPM
Mouse:15.1 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1855 Male, age 76, left hemisphere 31.5
2529 Female, age 94, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.2
2621 Female, age 67, right hemisphere 29.8
1898 Male, age 80, left hemisphere 28.8
2148 Female, age 91, left hemisphere 28.8
Dentate gyrus
nTPM: 28.2
2010 Male, age 76, both hemispheres 30.1
2246 Female, age 85, both hemispheres 29.2
2528 Male, age 74, both hemispheres 28.5
2531 Female, age 67, both hemispheres 27.8
2530 Female, age 94, left hemisphere 27.5
1927 Female, age 91, both hemispheres 26.2
Entorhinal gyrus
nTPM: 28.1
1787 Male, age 76, left hemisphere 30.4
2117 Female, age 91, right hemisphere 29.4
1938 Female, age 85, left hemisphere 28.6
2686 Male, age 75, right hemisphere 27.3
2764 Male, age 80, right hemisphere 27.1
2613 Female, age 94, left hemisphere 26.2
Hippocampus, CA1
nTPM: 28.3
2082 Female, age 91, right hemisphere 30.0
2045 Male, age 76, both hemispheres 29.2
2527 Male, age 74, both hemispheres 28.9
1873 Female, age 85, both hemispheres 28.3
2749 Male, age 80, left hemisphere 25.2
Hippocampus, CA2
nTPM: 28.4
2113 Female, age 91, right hemisphere 31.0
1940 Female, age 85, left hemisphere 29.4
2437 Female, age 94, left hemisphere 29.0
2249 Male, age 74, both hemispheres 27.4
1963 Male, age 80, left hemisphere 27.2
1892 Male, age 76, both hemispheres 26.4
Hippocampus, CA3
nTPM: 27.6
2861 Female, age 67, both hemispheres 30.8
1867 Male, age 76, both hemispheres 29.2
1891 Female, age 85, both hemispheres 28.7
2436 Male, age 74, both hemispheres 26.2
2137 Male, age 80, left hemisphere 25.9
2620 Female, age 94, left hemisphere 24.6
Parahippocampal cortex
nTPM: 28.2
2250 Female, age 67, right hemisphere 31.0
2018 Male, age 76, both hemispheres 30.7
2622 Female, age 67, right hemisphere 28.6
2692 Male, age 74, both hemispheres 28.5
2245 Female, age 91, both hemispheres 28.2
1990 Female, age 91, right hemisphere 27.8
1933 Female, age 85, both hemispheres 27.5
2532 Female, age 72, left hemisphere 26.8
2693 Female, age 94, both hemispheres 26.8
1850 Male, age 80, both hemispheres 25.8
Perirhinal gyrus
nTPM: 27.2
1847 Female, age 91, left hemisphere 27.9
1841 Female, age 85, right hemisphere 27.7
2521 Female, age 94, right hemisphere 27.7
1794 Male, age 80, right hemisphere 27.2
2848 Male, age 76, right hemisphere 25.5
Subiculum
nTPM: 28.9
2619 Male, age 74, both hemispheres 31.4
2729 Female, age 91, right hemisphere 30.4
2042 Male, age 76, both hemispheres 30.1
2438 Female, age 94, left hemisphere 27.5
1977 Female, age 85, both hemispheres 27.4
1901 Male, age 80, both hemispheres 26.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 44.3
Min nTPM: 4.1
Std nTPM: 7.0
Median nTPM: 12.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 44.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 39.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 38.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 36.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 36.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 36.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 28.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 28.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 27.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 27.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 26.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.3
FF:10153-102I9 76 years, female 96.6
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 38.6
Min nTPM: 27.3
Sample A Female 28.8
Sample B Female 38.6
Sample C Male 35.2
Sample D Male 27.3
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 40.2
Min nTPM: 28.3
Sample A Female 28.3
Sample B Female 40.2
Sample C Male 38.5
Sample D Male 29.0
Subiculum
nTPM: 44.2
Samples: 4

Max nTPM: 52.7
Min nTPM: 37.3
Sample A Female 46.4
Sample B Female 52.7
Sample C Male 40.2
Sample D Male 37.3
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 57.8
Min nTPM: 31.1
Sample A Female 31.1
Sample B Female 47.1
Sample C Male 57.8
Sample D Male 33.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.7
Sample A Male 16.0
Sample B Male 14.0
Sample C Female 13.7
Sample D Female 16.6
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.6
Sample A Male 12.6
Sample B Male 11.6
Sample C Female 14.3
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
75695652 Antisense, RP_060518_04_C03, Mouse strain C57BL/6J (56 days, male) 1.3

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