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SPOCK2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:113.8 nTPM
FANTOM5:373.8 Scaled Tags Per Million
Pig:196.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044605
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 113.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 113.8
Samples: 246

Max nTPM: 168.7
Min nTPM: 48.0
Std nTPM: 25.7
Median nTPM: 115.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 168.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 167.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 165.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 162.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 161.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 159.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 159.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 158.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 158.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 156.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 155.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 154.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 153.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 153.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 153.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 153.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 152.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 151.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 149.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 149.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 149.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 147.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 147.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 145.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 145.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 145.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 144.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 144.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 144.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 143.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 143.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 142.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 142.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 141.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 141.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 141.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 140.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 140.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 140.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 140.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 139.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 138.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 137.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 137.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 137.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 137.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 136.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 136.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 135.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 134.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 134.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 133.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 133.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 133.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 133.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 132.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 132.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 132.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 132.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 131.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 130.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 130.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 130.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 129.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 129.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 129.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 129.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 129.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 129.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 129.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 128.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 128.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 127.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 127.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 126.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 126.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 125.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 125.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 125.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 125.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 124.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 124.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 123.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 123.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 123.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 123.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 123.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 122.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 122.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 121.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 121.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 121.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 121.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 121.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 121.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 121.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 120.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 120.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 119.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 119.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 118.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 117.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 117.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 117.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 117.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 117.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 116.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 116.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 116.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 115.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 115.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 115.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 114.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 114.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 113.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 113.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 113.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 112.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 112.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 112.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 112.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 111.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 111.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 111.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 111.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 111.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 110.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 110.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 110.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 109.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 109.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 108.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 107.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 107.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 106.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 106.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 106.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 105.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 104.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 104.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 104.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 104.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 104.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 103.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 103.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 102.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 102.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 101.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 100.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 100.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 99.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 99.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 99.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 98.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 98.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 98.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 97.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 97.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 96.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 96.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 95.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 95.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 95.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 95.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 95.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 95.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 94.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 92.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 91.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 91.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 91.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 91.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 91.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 91.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 90.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 89.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 89.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 89.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 88.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 88.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 88.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 88.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 87.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 87.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 86.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 84.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 83.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 80.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 80.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 78.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 78.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 77.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 75.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 74.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 74.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 73.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 72.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 71.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 70.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 70.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 63.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 62.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 62.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 62.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 57.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 55.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 55.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 48.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 373.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 373.8
FF:10164-103B2 76 years, female 373.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 196.3
Pig sample Sample description nTPM
Caudate
nTPM: 196.3
Samples: 4

Max nTPM: 244.9
Min nTPM: 151.3
Sample A Female 151.3
Sample B Female 193.6
Sample C Male 244.9
Sample D Male 195.2

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