PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:220.1 nTPM
HPA:220.1 nTPM
FANTOM5:534.8 Scaled Tags Per Million
Pig:221.5 nTPM
Mouse:195.9 nTPM
Allen mouse:14.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 220.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 112.1
1984 Male, age 76, both hemispheres 164.6
2301 Female, age 85, both hemispheres 118.3
2090 Male, age 80, both hemispheres 86.5
2188 Female, age 91, both hemispheres 78.9
Area postrema
nTPM: 105.1
2799 Male, age 61, both hemispheres 124.6
2054 Male, age 76, both hemispheres 117.1
2306 Male, age 80, both hemispheres 73.5
Cuneate nuclei
nTPM: 138.6
2131 Male, age 76, both hemispheres 193.7
2376 Male, age 61, both hemispheres 131.0
2381 Male, age 80, both hemispheres 91.0
Dorsal cochlear nucleus
nTPM: 133.5
2802 Male, age 74, right hemisphere 184.1
2058 Male, age 76, both hemispheres 140.0
2370 Male, age 61, both hemispheres 132.5
2378 Male, age 80, both hemispheres 108.8
2187 Female, age 91, both hemispheres 102.4
Dorsal medullary reticular nucleus
nTPM: 134.8
2040 Female, age 85, both hemispheres 152.7
2088 Male, age 76, both hemispheres 128.1
2373 Male, age 61, both hemispheres 123.7
Dorsal motor vagal complex
nTPM: 143.4
2133 Female, age 91, both hemispheres 182.4
2844 Male, age 55, unknown 175.8
2797 Male, age 61, both hemispheres 164.8
2000 Male, age 74, unknown 143.3
2643 Male, age 74, both hemispheres 141.6
2813 Female, age 72, unknown 127.0
2185 Male, age 76, both hemispheres 118.6
2807 Female, age 85, both hemispheres 93.6
Dorsal tegmental nucleus
nTPM: 122.3
2083 Male, age 80, both hemispheres 143.2
1936 Male, age 76, left hemisphere 130.8
2326 Male, age 74, both hemispheres 108.6
2358 Male, age 61, both hemispheres 106.4
Dorsolateral tegmental area
nTPM: 111.9
2141 Male, age 76, both hemispheres 167.3
2654 Male, age 80, both hemispheres 126.3
2751 Female, age 85, both hemispheres 112.0
2360 Male, age 74, both hemispheres 93.9
2337 Male, age 61, both hemispheres 60.0
Gigantocellular reticular nuclei, medullary
nTPM: 143.9
2462 Male, age 74, both hemispheres 222.4
2310 Male, age 80, both hemispheres 168.6
2387 Female, age 91, both hemispheres 130.4
1876 Female, age 85, both hemispheres 121.7
2022 Male, age 76, right hemisphere 120.1
2314 Male, age 61, both hemispheres 100.0
Gigantocellular reticular nuclei, pars
nTPM: 164.7
2168 Male, age 76, both hemispheres 233.9
2084 Female, age 85, both hemispheres 164.3
2330 Male, age 80, both hemispheres 148.4
2706 Male, age 80, both hemispheres 144.2
2336 Male, age 61, both hemispheres 132.8
Inferior olive
nTPM: 118.3
2085 Female, age 85, both hemispheres 133.4
2628 Female, age 91, both hemispheres 127.7
2563 Male, age 74, both hemispheres 123.5
2379 Male, age 80, both hemispheres 110.4
2178 Male, age 61, both hemispheres 96.2
Kolliker-Fuse nucleus
nTPM: 130.3
2163 Male, age 80, both hemispheres 163.5
2315 Male, age 76, right hemisphere 122.9
2793 Female, age 91, left hemisphere 104.4
Lateral lemniscal nuclei
nTPM: 176.5
2169 Male, age 76, both hemispheres 218.6
2453 Male, age 74, right hemisphere 195.8
2036 Male, age 80, both hemispheres 195.6
2746 Female, age 85, left hemisphere 153.5
2320 Female, age 91, left hemisphere 118.9
Lateral medullary reticular nucleus
nTPM: 115.4
2044 Male, age 76, both hemispheres 170.0
2804 Female, age 91, both hemispheres 146.0
2190 Female, age 85, both hemispheres 109.7
2374 Male, age 61, both hemispheres 108.5
2852 Male, age 80, both hemispheres 86.3
2305 Male, age 74, both hemispheres 71.9
Lateral parabrachial nucleus
nTPM: 123.5
2139 Female, age 85, right hemisphere 187.6
2790 Male, age 61, both hemispheres 130.9
2013 Male, age 80, both hemispheres 110.1
2792 Male, age 76, both hemispheres 65.2
Lateral vestibular nucleus
nTPM: 140.4
2184 Male, age 76, both hemispheres 170.1
2311 Male, age 80, both hemispheres 110.8
Locus coeruleus
nTPM: 167.0
2123 Female, age 91, both hemispheres 207.3
2317 Female, age 72, unknown 171.8
2720 Male, age 74, both hemispheres 169.6
1980 Male, age 76, both hemispheres 169.4
2162 Male, age 80, both hemispheres 159.4
2014 Male, age 55, unknown 159.2
2788 Male, age 74, unknown 132.6
Medial olivary nucleus
nTPM: 82.4
2138 Female, age 91, both hemispheres 105.1
2851 Male, age 80, both hemispheres 101.0
1962 Male, age 76, both hemispheres 75.9
1943 Male, age 61, both hemispheres 47.7
Medial parabrachial nucleus
nTPM: 123.8
2854 Male, age 80, both hemispheres 141.7
2156 Male, age 61, both hemispheres 130.7
2786 Male, age 76, both hemispheres 128.5
2463 Female, age 85, right hemisphere 113.5
2170 Female, age 91, both hemispheres 104.7
Medial periolivary nuclei
nTPM: 179.1
2063 Male, age 76, both hemispheres 263.6
2171 Female, age 85, both hemispheres 245.5
2791 Male, age 74, right hemisphere 155.6
2458 Female, age 91, both hemispheres 117.7
2081 Male, age 80, both hemispheres 113.0
Medial vestibular nucleus
nTPM: 154.9
2134 Male, age 76, both hemispheres 186.4
2624 Male, age 61, both hemispheres 171.6
2743 Female, age 85, both hemispheres 158.1
2093 Male, age 80, both hemispheres 155.1
2803 Female, age 91, both hemispheres 131.2
2801 Male, age 74, both hemispheres 127.3
Motor facial nucleus
nTPM: 192.9
2062 Male, age 76, both hemispheres 280.5
2327 Male, age 80, both hemispheres 222.7
2795 Female, age 91, both hemispheres 193.0
2697 Female, age 85, both hemispheres 160.5
2365 Male, age 74, right hemisphere 155.5
2126 Male, age 61, both hemispheres 144.9
Motor hypoglossal nucleus
nTPM: 146.7
2461 Male, age 61, both hemispheres 178.3
2125 Female, age 91, both hemispheres 164.1
2132 Female, age 85, both hemispheres 146.9
2277 Male, age 76, both hemispheres 131.6
2182 Male, age 80, both hemispheres 112.3
Motor trigeminal nucleus
nTPM: 143.4
2079 Male, age 80, both hemispheres 191.7
2560 Male, age 74, both hemispheres 157.4
2309 Male, age 76, both hemispheres 130.0
2335 Male, age 61, both hemispheres 128.9
2321 Female, age 91, both hemispheres 108.9
Nuclei of the trapezoid body
nTPM: 220.1
2735 Female, age 85, both hemispheres 263.5
2159 Male, age 61, both hemispheres 253.9
1983 Male, age 76, both hemispheres 247.4
2166 Male, age 80, both hemispheres 174.0
2368 Female, age 91, both hemispheres 161.9
Nucleus ambiguus
nTPM: 160.5
2096 Female, age 85, both hemispheres 232.4
2071 Male, age 76, both hemispheres 88.7
Nucleus cuneatus
nTPM: 130.1
2564 Male, age 74, both hemispheres 178.2
2562 Male, age 61, both hemispheres 160.9
2100 Male, age 76, both hemispheres 155.3
2805 Female, age 91, both hemispheres 129.0
2808 Female, age 85, both hemispheres 90.2
2380 Male, age 80, both hemispheres 67.3
Nucleus gracilis
nTPM: 81.1
2627 Male, age 74, both hemispheres 104.8
2299 Female, age 85, both hemispheres 85.5
2382 Male, age 80, both hemispheres 53.0
Nucleus raphe magnus
nTPM: 212.1
2160 Male, age 61, both hemispheres 290.8
2172 Female, age 85, both hemispheres 271.9
2328 Male, age 80, both hemispheres 199.2
2455 Male, age 74, both hemispheres 196.1
2051 Male, age 76, both hemispheres 182.2
2459 Female, age 91, both hemispheres 132.6
Nucleus raphe obscurus
nTPM: 94.8
2800 Male, age 61, midline 118.1
2845 Female, age 85, midline 101.5
2142 Male, age 76, midline 64.9
Nucleus raphe pallidus
nTPM: 90.4
2183 Male, age 80, midline 125.7
1924 Male, age 61, midline 91.1
2145 Male, age 76, midline 54.4
Nucleus tractus solitarii
nTPM: 119.9
2656 Male, age 76, both hemispheres 147.0
2307 Male, age 80, both hemispheres 121.2
2144 Female, age 91, right hemisphere 108.8
2191 Female, age 85, both hemispheres 102.6
Paramedian reticular nucleus
nTPM: 149.1
2050 Female, age 85, both hemispheres 185.1
2313 Male, age 61, both hemispheres 167.7
2057 Male, age 80, both hemispheres 163.9
2052 Male, age 76, both hemispheres 79.6
Parvicellular reticular nuclei
nTPM: 160.5
2558 Male, age 74, both hemispheres 200.0
2119 Male, age 80, both hemispheres 144.4
2095 Male, age 76, both hemispheres 137.1
Parvicellular reticular nuclei, medullary
nTPM: 147.7
2091 Female, age 85, both hemispheres 161.1
2189 Female, age 91, both hemispheres 142.0
2181 Male, age 80, left hemisphere 140.0
Peritrigeminal nucleus
nTPM: 148.8
2179 Male, age 61, both hemispheres 152.3
2136 Male, age 76, both hemispheres 148.2
2067 Female, age 85, both hemispheres 146.0
Pontine nuclei
nTPM: 183.1
2787 Female, age 85, both hemispheres 263.1
2727 Male, age 61, right hemisphere 241.1
1968 Male, age 76, left hemisphere 223.7
1863 Male, age 55, unknown 211.6
2109 Female, age 72, unknown 191.7
2115 Male, age 80, left hemisphere 131.7
2454 Male, age 74, left hemisphere 117.4
2319 Female, age 91, both hemispheres 84.2
Pontine raphe nucleus
nTPM: 190.2
2122 Female, age 85, midline 205.0
2853 Male, age 76, midline 175.4
Posteroventral cochlear nucleus
nTPM: 100.1
2752 Female, age 85, both hemispheres 156.8
2070 Male, age 76, both hemispheres 128.3
2371 Male, age 61, both hemispheres 118.8
2341 Male, age 80, both hemispheres 65.9
2135 Female, age 91, both hemispheres 30.6
Prepositus hypoglossal nucleus
nTPM: 143.3
2855 Female, age 85, right hemisphere 148.0
2086 Male, age 80, both hemispheres 138.6
Principal sensory trigeminal nucleus
nTPM: 181.8
2158 Male, age 61, both hemispheres 276.1
2008 Male, age 80, left hemisphere 198.4
2324 Male, age 76, both hemispheres 157.5
2367 Female, age 91, left hemisphere 95.1
Reticular pontine nucleus, caudal
nTPM: 157.8
2332 Male, age 80, right hemisphere 231.6
2092 Male, age 76, both hemispheres 176.3
2457 Female, age 91, both hemispheres 118.8
2559 Male, age 74, both hemispheres 104.6
Reticular pontine nucleus, oral
nTPM: 124.8
2012 Female, age 85, both hemispheres 160.7
2361 Male, age 74, both hemispheres 126.8
1939 Male, age 80, both hemispheres 123.1
2167 Male, age 76, both hemispheres 122.2
2366 Female, age 91, both hemispheres 91.0
Reticulotegmental nucleus
nTPM: 163.2
2325 Male, age 76, both hemispheres 193.1
2452 Male, age 74, both hemispheres 168.9
2333 Male, age 80, both hemispheres 163.3
2322 Female, age 91, both hemispheres 127.7
Spinal trigeminal nucleus, caudal
nTPM: 142.2
2390 Female, age 91, both hemispheres 185.2
2447 Male, age 76, both hemispheres 184.0
2308 Male, age 80, both hemispheres 117.4
2642 Male, age 74, both hemispheres 115.7
2312 Male, age 61, both hemispheres 108.4
Spinal trigeminal nucleus, interpolar
nTPM: 172.8
2625 Male, age 61, both hemispheres 240.0
2066 Male, age 76, right hemisphere 224.6
2389 Female, age 91, both hemispheres 138.1
2386 Female, age 85, both hemispheres 133.7
2033 Male, age 80, both hemispheres 127.5
Spinal trigeminal nucleus, oral
nTPM: 141.3
2737 Female, age 85, both hemispheres 156.5
2164 Male, age 80, both hemispheres 155.7
1978 Male, age 76, both hemispheres 111.8
Spinal vestibular nucleus
nTPM: 129.4
2186 Female, age 91, both hemispheres 138.2
2780 Male, age 80, both hemispheres 136.7
2796 Male, age 61, both hemispheres 134.6
2748 Male, age 76, both hemispheres 123.6
2384 Male, age 74, both hemispheres 123.5
2806 Female, age 85, both hemispheres 119.6
Subcoeruleus area
nTPM: 143.5
2089 Male, age 76, left hemisphere 185.8
2323 Female, age 91, left hemisphere 158.6
1958 Male, age 80, both hemispheres 154.8
2451 Male, age 74, both hemispheres 132.0
2369 Female, age 85, left hemisphere 86.4
Superior olive
nTPM: 164.4
1875 Female, age 85, both hemispheres 198.3
2329 Male, age 80, right hemisphere 182.9
2020 Male, age 76, both hemispheres 161.2
2561 Female, age 91, both hemispheres 146.4
2364 Male, age 74, right hemisphere 133.0
Superior vestibular nucleus
nTPM: 108.5
2061 Male, age 76, both hemispheres 126.7
2015 Male, age 80, both hemispheres 121.7
2383 Male, age 74, both hemispheres 77.1
Ventral medullary reticular nucleus
nTPM: 127.7
2060 Male, age 76, both hemispheres 128.7
2372 Male, age 61, both hemispheres 126.8
Ventral periolivary nuclei
nTPM: 194.1
2130 Female, age 85, both hemispheres 262.0
2165 Male, age 80, both hemispheres 226.9
2794 Female, age 91, left hemisphere 148.5
2023 Male, age 76, both hemispheres 138.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 134.9
2741 Female, age 85, both hemispheres 163.3
1986 Male, age 76, both hemispheres 159.9
2302 Female, age 91, both hemispheres 142.5
2180 Male, age 61, both hemispheres 113.6
2118 Male, age 80, both hemispheres 95.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 150.9
1959 Male, age 76, both hemispheres 182.8
2449 Male, age 74, both hemispheres 174.3
2161 Male, age 80, both hemispheres 162.7
2840 Female, age 85, both hemispheres 139.2
2456 Female, age 91, both hemispheres 131.7
2359 Male, age 61, both hemispheres 114.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 534.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 331.7
FF:10182-103D2 60 years, female 423.2
FF:10165-103B3 76 years, female 240.2
Medulla oblongata
Scaled Tags Per Million: 254.9
FF:10038-101F2 18-64 years, mixed 347.1
FF:10174-103C3 60 years, female 238.0
FF:10155-103A2 76 years, female 179.6
Pons
Scaled Tags Per Million: 534.8
FF:10033-101E6 18-54 years, mixed 534.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 221.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 136.7
Samples: 4

Max nTPM: 151.3
Min nTPM: 96.1
Sample A Female 151.3
Sample B Female 151.0
Sample C Male 148.2
Sample D Male 96.1
Pons
nTPM: 221.6
Samples: 4

Max nTPM: 374.8
Min nTPM: 156.4
Sample A Female 374.8
Sample B Female 167.3
Sample C Male 156.4
Sample D Male 187.7

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 195.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 195.9
Samples: 4

Max nTPM: 202.9
Min nTPM: 183.8
Sample A Male 195.2
Sample B Male 202.9
Sample C Female 201.6
Sample D Female 183.8

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.2
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 18.8
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 9.6
Pons
Expression energy: 13.7
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 18.1
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 9.4

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