HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.8 nTPM
HPA:37.8 nTPM
GTEx:34.7 nTPM
FANTOM5:93.1 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:78.1 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037480
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
1898 Male, age 80, left hemisphere 38.1
2621 Female, age 67, right hemisphere 37.0
1855 Male, age 76, left hemisphere 36.8
2148 Female, age 91, left hemisphere 32.7
1911 Female, age 85, right hemisphere 29.8
2529 Female, age 94, left hemisphere 28.0
Dentate gyrus
nTPM: 34.5
1927 Female, age 91, both hemispheres 41.2
2246 Female, age 85, both hemispheres 37.5
2010 Male, age 76, both hemispheres 36.9
2531 Female, age 67, both hemispheres 31.7
2528 Male, age 74, both hemispheres 30.1
2530 Female, age 94, left hemisphere 29.7
Entorhinal gyrus
nTPM: 33.2
1938 Female, age 85, left hemisphere 36.2
2613 Female, age 94, left hemisphere 35.2
2764 Male, age 80, right hemisphere 34.5
1787 Male, age 76, left hemisphere 33.8
2686 Male, age 75, right hemisphere 29.9
2117 Female, age 91, right hemisphere 29.4
Hippocampus, CA1
nTPM: 37.8
2749 Male, age 80, left hemisphere 52.9
1873 Female, age 85, both hemispheres 40.5
2527 Male, age 74, both hemispheres 33.3
2082 Female, age 91, right hemisphere 32.4
2045 Male, age 76, both hemispheres 30.0
Hippocampus, CA2
nTPM: 35.1
1963 Male, age 80, left hemisphere 44.7
1892 Male, age 76, both hemispheres 41.9
2249 Male, age 74, both hemispheres 31.4
2437 Female, age 94, left hemisphere 31.1
2113 Female, age 91, right hemisphere 30.9
1940 Female, age 85, left hemisphere 30.7
Hippocampus, CA3
nTPM: 32.8
2137 Male, age 80, left hemisphere 37.3
1867 Male, age 76, both hemispheres 33.9
2436 Male, age 74, both hemispheres 32.5
2620 Female, age 94, left hemisphere 32.2
1891 Female, age 85, both hemispheres 30.9
2861 Female, age 67, both hemispheres 30.3
Parahippocampal cortex
nTPM: 33.9
1850 Male, age 80, both hemispheres 38.0
1933 Female, age 85, both hemispheres 36.6
1990 Female, age 91, right hemisphere 35.4
2250 Female, age 67, right hemisphere 34.8
2693 Female, age 94, both hemispheres 34.7
2245 Female, age 91, both hemispheres 33.3
2622 Female, age 67, right hemisphere 32.7
2018 Male, age 76, both hemispheres 32.3
2532 Female, age 72, left hemisphere 32.2
2692 Male, age 74, both hemispheres 29.0
Perirhinal gyrus
nTPM: 37.0
1847 Female, age 91, left hemisphere 42.6
1794 Male, age 80, right hemisphere 36.9
1841 Female, age 85, right hemisphere 36.0
2521 Female, age 94, right hemisphere 35.0
2848 Male, age 76, right hemisphere 34.4
Subiculum
nTPM: 30.6
1977 Female, age 85, both hemispheres 33.8
1901 Male, age 80, both hemispheres 33.3
2438 Female, age 94, left hemisphere 29.6
2619 Male, age 74, both hemispheres 29.1
2042 Male, age 76, both hemispheres 29.0
2729 Female, age 91, right hemisphere 29.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.7
Samples: 197

Max nTPM: 77.2
Min nTPM: 10.5
Std nTPM: 11.5
Median nTPM: 32.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 75.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 68.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 66.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 64.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 62.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 60.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 60.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 59.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 58.6
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 58.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.1
FF:10169-103B7 60 years, female 123.4
FF:10153-102I9 76 years, female 62.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 35.9
Min nTPM: 27.1
Sample A Female 35.9
Sample B Female 31.0
Sample C Male 27.1
Sample D Male 31.8
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.8
Min nTPM: 22.5
Sample A Female 26.4
Sample B Female 29.8
Sample C Male 27.6
Sample D Male 22.5
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 29.1
Min nTPM: 24.4
Sample A Female 29.1
Sample B Female 27.4
Sample C Male 25.0
Sample D Male 24.4
Ventral hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 38.7
Min nTPM: 25.0
Sample A Female 38.7
Sample B Female 30.1
Sample C Male 36.1
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.3
Samples: 4

Max nTPM: 72.7
Min nTPM: 63.6
Sample A Male 63.6
Sample B Male 65.5
Sample C Female 72.7
Sample D Female 67.5
Hippocampal formation
nTPM: 78.1
Samples: 4

Max nTPM: 81.6
Min nTPM: 74.6
Sample A Male 80.2
Sample B Male 74.6
Sample C Female 81.6
Sample D Female 76.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
74658238 Antisense, RP_060220_02_D04, Mouse strain C57BL/6J (56 days, male) 10.0
68196906 Antisense, RP_041116_01_C11, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

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