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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bowman's capsule: Not detected
Cells in glomeruli: Medium
Collecting ducts: Not detected
Distal tubules: Not detected
Proximal tubules (cell body): Not detected
Proximal tubules (microvilli): Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:312.2 nTPM
HPA:201.6 nTPM
GTEx:312.2 nTPM
FANTOM5:484.7 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041264Antibody HPA041271Antibody CAB000002Antibody CAB003761Antibody CAB013531
Bowman's capsule ----Not detected
Cells in glomeruli LowLowNot detectedNot detectedMedium
Cells in tubules MediumMediumNot detectedMedium-
Collecting ducts ----Not detected
Distal tubules ----Not detected
Proximal tubules (cell body) ----Not detected
Proximal tubules (microvilli) ----Not detected









KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 201.6
overview
Female, age 58
Kidney sample 55
nTPM: 77.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 141.4
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 111.5
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 175.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 206.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 391.8
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 340.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 235.7
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 133.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 312.2
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 312.2
Samples: 85

Max nTPM: 2000.3
Min nTPM: 30.8
Std nTPM: 307.6
Median nTPM: 221.3
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 2000.3
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1185.0
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 1135.2
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 1035.8
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 1014.3
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 797.9
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 784.7
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 760.2
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 731.5
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 724.9
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 639.6
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 522.8
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 503.4
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 465.8
GTEX-14C39-2126-SM-664OH 40-49 years, male 451.6
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 424.2
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 403.7
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 364.4
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 359.3
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 337.7
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 330.3
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 319.4
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 309.3
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 299.5
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 297.2
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 293.9
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 289.4
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 283.0
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 280.3
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 275.1
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 266.6
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 257.8
GTEX-O5YV-1226-SM-EV795 60-69 years, female 252.8
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 250.5
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 249.0
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 242.3
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 240.1
GTEX-12696-0926-SM-5FQTV 60-69 years, male 239.7
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 233.9
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 228.7
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 227.9
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 224.9
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 221.3
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 212.1
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 211.2
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 205.9
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 205.7
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 203.7
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 202.3
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 201.1
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 197.6
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 197.5
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 197.2
GTEX-13112-2126-SM-5GCO4 50-59 years, male 192.4
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 187.6
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 181.7
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 175.9
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 172.4
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 165.4
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 162.4
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 158.9
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 153.8
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 152.9
GTEX-RN64-1626-SM-48FD7 50-59 years, male 149.3
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 134.4
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 133.8
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 133.4
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 114.0
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 112.0
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 111.1
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 106.1
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 104.7
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 101.8
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 100.3
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 100.1
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 97.2
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 95.7
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 81.8
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 81.4
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 78.3
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 73.3
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 35.4
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 34.9
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 31.9
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 30.8
Show allShow less
Kidney - Medulla
Average nTPM: 191.4
Samples: 4

Max nTPM: 288.5
Min nTPM: 93.5
Std nTPM: 69.2
Median nTPM: 191.9
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 288.5
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 200.6
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 183.1
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 93.5

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 484.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 484.7
FF:10017-101C8 60,62,63 years, female 484.7

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