HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.5 nTPM
HPA:43.5 nTPM
GTEx:48.1 nTPM
FANTOM5:126.3 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:18.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057052Antibody CAB034892
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.7
1911 Female, age 85, right hemisphere 42.7
1898 Male, age 80, left hemisphere 42.1
2621 Female, age 67, right hemisphere 40.8
1855 Male, age 76, left hemisphere 39.9
2529 Female, age 94, left hemisphere 36.5
2148 Female, age 91, left hemisphere 36.2
Dentate gyrus
nTPM: 40.5
2530 Female, age 94, left hemisphere 45.5
2010 Male, age 76, both hemispheres 44.9
2528 Male, age 74, both hemispheres 43.0
1927 Female, age 91, both hemispheres 37.6
2246 Female, age 85, both hemispheres 36.2
2531 Female, age 67, both hemispheres 35.8
Entorhinal gyrus
nTPM: 37.8
2117 Female, age 91, right hemisphere 49.0
2764 Male, age 80, right hemisphere 38.5
1938 Female, age 85, left hemisphere 38.4
1787 Male, age 76, left hemisphere 37.5
2613 Female, age 94, left hemisphere 34.0
2686 Male, age 75, right hemisphere 29.6
Hippocampus, CA1
nTPM: 37.4
2527 Male, age 74, both hemispheres 40.1
1873 Female, age 85, both hemispheres 39.1
2045 Male, age 76, both hemispheres 37.3
2082 Female, age 91, right hemisphere 36.8
2749 Male, age 80, left hemisphere 33.6
Hippocampus, CA2
nTPM: 41.2
2249 Male, age 74, both hemispheres 47.2
1940 Female, age 85, left hemisphere 45.0
1963 Male, age 80, left hemisphere 42.0
2113 Female, age 91, right hemisphere 39.1
2437 Female, age 94, left hemisphere 38.2
1892 Male, age 76, both hemispheres 35.7
Hippocampus, CA3
nTPM: 34.8
1891 Female, age 85, both hemispheres 44.5
2436 Male, age 74, both hemispheres 38.7
1867 Male, age 76, both hemispheres 36.8
2620 Female, age 94, left hemisphere 30.7
2137 Male, age 80, left hemisphere 29.5
2861 Female, age 67, both hemispheres 28.5
Parahippocampal cortex
nTPM: 36.1
2018 Male, age 76, both hemispheres 42.4
1990 Female, age 91, right hemisphere 40.6
2532 Female, age 72, left hemisphere 39.7
1933 Female, age 85, both hemispheres 37.6
1850 Male, age 80, both hemispheres 37.0
2693 Female, age 94, both hemispheres 35.9
2250 Female, age 67, right hemisphere 34.7
2245 Female, age 91, both hemispheres 34.0
2692 Male, age 74, both hemispheres 33.9
2622 Female, age 67, right hemisphere 25.5
Perirhinal gyrus
nTPM: 34.4
2521 Female, age 94, right hemisphere 36.5
1794 Male, age 80, right hemisphere 35.3
2848 Male, age 76, right hemisphere 34.5
1841 Female, age 85, right hemisphere 33.1
1847 Female, age 91, left hemisphere 32.5
Subiculum
nTPM: 43.5
2042 Male, age 76, both hemispheres 52.8
1901 Male, age 80, both hemispheres 46.3
1977 Female, age 85, both hemispheres 44.0
2438 Female, age 94, left hemisphere 40.4
2729 Female, age 91, right hemisphere 40.0
2619 Male, age 74, both hemispheres 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 123.7
Min nTPM: 14.2
Std nTPM: 23.0
Median nTPM: 41.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 123.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 120.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 113.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 110.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 106.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 97.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 96.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 96.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 95.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 94.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 93.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.3
FF:10153-102I9 76 years, female 131.3
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 36.7
Min nTPM: 25.9
Sample A Female 36.7
Sample B Female 29.3
Sample C Male 33.1
Sample D Male 25.9
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.7
Sample A Female 19.0
Sample B Female 21.0
Sample C Male 18.4
Sample D Male 15.7
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.7
Sample A Female 23.0
Sample B Female 21.9
Sample C Male 16.7
Sample D Male 18.8
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 29.7
Min nTPM: 19.7
Sample A Female 29.7
Sample B Female 19.7
Sample C Male 27.0
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.7
Sample A Male 14.7
Sample B Male 15.1
Sample C Female 17.0
Sample D Female 16.2
Hippocampal formation
nTPM: 18.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.3
Sample A Male 16.3
Sample B Male 16.4
Sample C Female 19.6
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69174565 Antisense, RP_050329_03_A10, Mouse strain C57BL/6J (56 days, male) 0.6
72129290 Antisense, RP_051017_03_F06, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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