HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:14.9 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:65.0 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008028
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
1898 Male, age 80, left hemisphere 17.7
2621 Female, age 67, right hemisphere 16.1
2148 Female, age 91, left hemisphere 15.8
2529 Female, age 94, left hemisphere 15.4
1855 Male, age 76, left hemisphere 15.2
1911 Female, age 85, right hemisphere 13.6
Dentate gyrus
nTPM: 17.2
2531 Female, age 67, both hemispheres 20.8
1927 Female, age 91, both hemispheres 17.5
2530 Female, age 94, left hemisphere 17.1
2010 Male, age 76, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.1
2528 Male, age 74, both hemispheres 15.0
Entorhinal gyrus
nTPM: 17.4
2764 Male, age 80, right hemisphere 20.8
2613 Female, age 94, left hemisphere 17.9
1938 Female, age 85, left hemisphere 17.7
1787 Male, age 76, left hemisphere 17.3
2117 Female, age 91, right hemisphere 15.5
2686 Male, age 75, right hemisphere 15.2
Hippocampus, CA1
nTPM: 17.2
2749 Male, age 80, left hemisphere 21.6
2045 Male, age 76, both hemispheres 18.3
1873 Female, age 85, both hemispheres 15.6
2527 Male, age 74, both hemispheres 15.4
2082 Female, age 91, right hemisphere 15.2
Hippocampus, CA2
nTPM: 15.9
1892 Male, age 76, both hemispheres 17.3
1963 Male, age 80, left hemisphere 16.4
2437 Female, age 94, left hemisphere 16.3
1940 Female, age 85, left hemisphere 16.1
2249 Male, age 74, both hemispheres 14.7
2113 Female, age 91, right hemisphere 14.3
Hippocampus, CA3
nTPM: 18.3
2137 Male, age 80, left hemisphere 22.2
2620 Female, age 94, left hemisphere 19.8
2861 Female, age 67, both hemispheres 19.5
1867 Male, age 76, both hemispheres 17.2
2436 Male, age 74, both hemispheres 16.0
1891 Female, age 85, both hemispheres 15.0
Parahippocampal cortex
nTPM: 16.8
1850 Male, age 80, both hemispheres 19.1
1933 Female, age 85, both hemispheres 18.1
2245 Female, age 91, both hemispheres 17.8
2018 Male, age 76, both hemispheres 16.9
2532 Female, age 72, left hemisphere 16.9
1990 Female, age 91, right hemisphere 16.1
2250 Female, age 67, right hemisphere 16.1
2693 Female, age 94, both hemispheres 16.0
2622 Female, age 67, right hemisphere 15.7
2692 Male, age 74, both hemispheres 15.2
Perirhinal gyrus
nTPM: 19.7
1794 Male, age 80, right hemisphere 22.8
1847 Female, age 91, left hemisphere 20.9
1841 Female, age 85, right hemisphere 19.3
2521 Female, age 94, right hemisphere 17.9
2848 Male, age 76, right hemisphere 17.6
Subiculum
nTPM: 15.3
1977 Female, age 85, both hemispheres 17.4
1901 Male, age 80, both hemispheres 17.1
2619 Male, age 74, both hemispheres 15.1
2042 Male, age 76, both hemispheres 14.7
2729 Female, age 91, right hemisphere 14.3
2438 Female, age 94, left hemisphere 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 31.5
Min nTPM: 3.7
Std nTPM: 4.9
Median nTPM: 14.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 31.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 29.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 28.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 28.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 25.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 25.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 24.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.0
FF:10153-102I9 76 years, female 25.4
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.7
Sample A Female 8.1
Sample B Female 7.7
Sample C Male 6.7
Sample D Male 7.0
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.8
Sample A Female 11.5
Sample B Female 9.8
Sample C Male 12.5
Sample D Male 10.6
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.2
Sample A Female 13.8
Sample B Female 11.2
Sample C Male 11.3
Sample D Male 12.0
Ventral hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 11.5
Min nTPM: 6.8
Sample A Female 8.3
Sample B Female 8.5
Sample C Male 11.5
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 73.5
Min nTPM: 59.0
Sample A Male 59.8
Sample B Male 67.6
Sample C Female 59.0
Sample D Female 73.5
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 54.3
Min nTPM: 49.2
Sample A Male 54.3
Sample B Male 52.0
Sample C Female 49.2
Sample D Female 52.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
564760 Antisense, RP_040826_01_D05, Mouse strain C57BL/6J (56 days, male) 10.8

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